Miyakogusa Predicted Gene

Lj3g3v0420540.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0420540.1 Non Chatacterized Hit- tr|I3S3W0|I3S3W0_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,50,3e-19,UBIQUINONE/MENAQUINONE BIOSYNTHESIS
METHYLTRANSFERASE,NULL; METHYLTRANSFERASE,NULL; seg,NULL;
S-aden,gene.g45262.t1.1
         (199 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g05690.1                                                       164   8e-41
Glyma06g05710.1                                                       153   1e-37
Glyma08g26720.1                                                       102   2e-22
Glyma20g21960.1                                                        91   1e-18
Glyma06g05700.1                                                        72   3e-13
Glyma03g23460.1                                                        62   3e-10

>Glyma04g05690.1 
          Length = 393

 Score =  164 bits (414), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 71/85 (83%), Positives = 79/85 (92%)

Query: 115 FEDDVTVINHWLLNGKHYAQTSEEWLKIMDKNMSSIKPIMESTYGKDSAIQWTVYWRTYF 174
           F+DDVTV NHWL+NGKHYAQTSEEWLK MD+ M+ IKPIM+STYGKDSA +WT YWRT+F
Sbjct: 309 FQDDVTVTNHWLVNGKHYAQTSEEWLKRMDQRMTFIKPIMQSTYGKDSATKWTAYWRTFF 368

Query: 175 IAIAELFGYNNGEEWMVAHFLFKKK 199
           IA+AELFGYNNGEEWMVAHFLFKKK
Sbjct: 369 IAVAELFGYNNGEEWMVAHFLFKKK 393



 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 58/112 (51%), Gaps = 16/112 (14%)

Query: 1   MENALQLLYNTGVKLMLTSLERNLLPDAVIXXXXXXXXXXXXXXX--------------- 45
           ME  +QL Y T VKLML +LERN+LPD +                               
Sbjct: 39  MEGTMQLAYETVVKLMLAALERNVLPDVITRRLTRLLLATRLRSAYKPSSQLQLSDLLYF 98

Query: 46  -XXXQDMPIAVSTNKAKSQHYELPTSFFRLVLGKNLKYRDLQLQNLDIIVAD 96
               Q+MPIA++T+K KSQHYELPT+FF+LVLG NLKY      +  + + D
Sbjct: 99  AHSLQEMPIAINTDKPKSQHYELPTAFFKLVLGNNLKYSCCYFSSASMTLDD 150



 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 81  KYRDLQLQNLDIIVADISTFEMEASYDRIYSIGMFE 116
           K RDLQLQNL+IIVADISTFEME SYDRI+SI MFE
Sbjct: 210 KCRDLQLQNLNIIVADISTFEMETSYDRIFSIEMFE 245


>Glyma06g05710.1 
          Length = 355

 Score =  153 bits (386), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 67/85 (78%), Positives = 74/85 (87%)

Query: 115 FEDDVTVINHWLLNGKHYAQTSEEWLKIMDKNMSSIKPIMESTYGKDSAIQWTVYWRTYF 174
           F+DDVTVINHWL+NGKH AQTSEEWLK MD+ M+ IKPIMESTYGKDSA +WT YWR +F
Sbjct: 271 FQDDVTVINHWLVNGKHSAQTSEEWLKRMDQKMTYIKPIMESTYGKDSATKWTAYWRAFF 330

Query: 175 IAIAELFGYNNGEEWMVAHFLFKKK 199
           I  AE F YNNGEEWM+AHFLFKKK
Sbjct: 331 IVGAETFAYNNGEEWMIAHFLFKKK 355



 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 31/36 (86%), Positives = 33/36 (91%)

Query: 81  KYRDLQLQNLDIIVADISTFEMEASYDRIYSIGMFE 116
           K RDLQLQNL+IIVADI TFEMEASYDRI+SI MFE
Sbjct: 172 KCRDLQLQNLNIIVADIGTFEMEASYDRIFSIEMFE 207


>Glyma08g26720.1 
          Length = 194

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 46/71 (64%), Positives = 55/71 (77%), Gaps = 6/71 (8%)

Query: 115 FEDDVTVINHWLLNGKHYAQTSEEWLKIMDKNMSSIKPIMESTYGKDSAIQWTVYWRTYF 174
           F DDVTVI+HWL+NGKHY QT       +++ M+ IKPIM+ TYGKDS  +WT YWRT F
Sbjct: 129 FVDDVTVIHHWLVNGKHYTQTR------INQRMAYIKPIMQPTYGKDSPTKWTAYWRTSF 182

Query: 175 IAIAELFGYNN 185
           IA+AELFGYNN
Sbjct: 183 IAVAELFGYNN 193



 Score = 67.8 bits (164), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/52 (67%), Positives = 40/52 (76%), Gaps = 6/52 (11%)

Query: 81  KYRDLQLQNLDIIVADISTFEMEASYDRIYSIGMFE------DDVTVINHWL 126
           K RDLQLQNL+IIVADISTFEMEASYDRI+SI MFE      D +  I+ W+
Sbjct: 22  KCRDLQLQNLNIIVADISTFEMEASYDRIFSIEMFEHMKNYKDPLKKISKWM 73


>Glyma20g21960.1 
          Length = 302

 Score = 90.5 bits (223), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 38/54 (70%), Positives = 43/54 (79%)

Query: 146 NMSSIKPIMESTYGKDSAIQWTVYWRTYFIAIAELFGYNNGEEWMVAHFLFKKK 199
           N++ IKPIMESTYGKDSA +WT YWR +FI   E   YNNGEEWM+AHFLFK K
Sbjct: 247 NLTYIKPIMESTYGKDSATKWTAYWRAFFIVGKEFLAYNNGEEWMIAHFLFKNK 300


>Glyma06g05700.1 
          Length = 128

 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 50/102 (49%), Gaps = 41/102 (40%)

Query: 84  DLQLQNLDIIVADISTFEMEASYDRIYSIGMFEDDVTVINHWLLNGKHYAQTSEEWLKIM 143
           DLQLQNL+I V DISTFEMEAS    +                          E+ L+  
Sbjct: 67  DLQLQNLNITVPDISTFEMEASITEYFP-------------------------EKCLR-- 99

Query: 144 DKNMSSIKPIMESTYGKDSAIQWTVYWRTYFIAIAELFGYNN 185
                         YGKDSA +WT YWRT+FI +AELFGYNN
Sbjct: 100 --------------YGKDSATKWTAYWRTFFITVAELFGYNN 127


>Glyma03g23460.1 
          Length = 124

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/36 (83%), Positives = 32/36 (88%)

Query: 81  KYRDLQLQNLDIIVADISTFEMEASYDRIYSIGMFE 116
           K RDLQLQNL+IIVADI TFEMEASYD I+SI MFE
Sbjct: 56  KCRDLQLQNLNIIVADIGTFEMEASYDIIFSIEMFE 91