Miyakogusa Predicted Gene

Lj2g3v3337770.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3337770.1 Non Chatacterized Hit- tr|J3NCC2|J3NCC2_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G1,34.44,4e-17,FAS1 domain,FAS1 domain; no description,FAS1
domain; seg,NULL; FAS1,FAS1 domain; Fasciclin,FAS1 doma,77893_g.1
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g01050.1                                                       211   2e-55
Glyma09g01460.1                                                       102   2e-22
Glyma02g47600.1                                                        89   2e-18
Glyma17g15980.1                                                        71   4e-13
Glyma15g12360.1                                                        70   8e-13

>Glyma14g01050.1 
          Length = 174

 Score =  211 bits (537), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 108/162 (66%), Positives = 122/162 (75%)

Query: 1   MSDMRSRSYYGFVILLKILNSQPNSLQNNDLTFLMPSDEQLSQFSITPDELHDFLLSHSI 60
           M+DMRSRSYYGFVILLKILNSQPNSLQNNDLTFLMP+D++LSQFSI  D+LHDF+LSHSI
Sbjct: 12  MTDMRSRSYYGFVILLKILNSQPNSLQNNDLTFLMPNDDELSQFSIALDQLHDFILSHSI 71

Query: 61  PTXXXXXXXXXXXXGXXXXXXXXXXXXXXTNSGRSGLFVNNARIVTPNVCQTSSIRCHGI 120
           PT            G              TN GR+GLFVNNARIVTPNVCQ+SSIRCHGI
Sbjct: 72  PTPLVLSHLLHFPNGSVVPSSVPSRVISITNGGRTGLFVNNARIVTPNVCQSSSIRCHGI 131

Query: 121 SAALTFGSNVPSHHAPERKDPPKNSDVRNPVPSVKKTSIPRF 162
           SAALTF + VPSH AP+ K+ PKNS V NP  +V+K +IP F
Sbjct: 132 SAALTFDNMVPSHRAPKPKEDPKNSSVTNPSSTVEKMNIPPF 173


>Glyma09g01460.1 
          Length = 122

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 71/121 (58%), Gaps = 5/121 (4%)

Query: 1   MSDMRSRSYYGFVILLKILN--SQPNSLQNNDLTFLMPSDEQLSQFSITPDELHDFLLSH 58
           + DMR++SYYGF +LL++LN  SQPN   N DLTFLMP D++LS  SI+ DE+ +FLL H
Sbjct: 5   IGDMRAKSYYGFAMLLQMLNGTSQPN---NRDLTFLMPDDKELSASSISIDEVEEFLLKH 61

Query: 59  SIPTXXXXXXXXXXXXGXXXXXXXXXXXXXXTNSGRSGLFVNNARIVTPNVCQTSSIRCH 118
           +IP             G               N  R   FVNNA+IV+ NVC +S I+CH
Sbjct: 62  AIPMPLYFNDLSHFPTGTLVPSGNRTQMIRIHNRARGDFFVNNAQIVSANVCLSSVIKCH 121

Query: 119 G 119
           G
Sbjct: 122 G 122


>Glyma02g47600.1 
          Length = 91

 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/109 (48%), Positives = 61/109 (55%), Gaps = 28/109 (25%)

Query: 1   MSDMRSRSYYGFVILLKILNSQPNSLQNNDLTFLMPSDEQLSQFSITPDELHDFLLSHSI 60
           M+DMRS SYYGFVILLKILNSQPNSLQNNDLTFLMP+D             + F ++   
Sbjct: 11  MADMRSLSYYGFVILLKILNSQPNSLQNNDLTFLMPNDA----------IYYIFQMALWF 60

Query: 61  PTXXXXXXXXXXXXGXXXXXXXXXXXXXXTNSGRSGLFVNNARIVTPNV 109
           P+                           TNSGR+GLFVNNARIV  N+
Sbjct: 61  PS------------------SVLSRVINITNSGRTGLFVNNARIVALNL 91


>Glyma17g15980.1 
          Length = 220

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 4/124 (3%)

Query: 3   DMRSRSYYGFVILLKILNSQPNSLQNNDLTFLMPSDEQLSQFSITPDELHDFLLSHSIPT 62
           +M+  +Y+ FV+L+   N  P      ++TFLMP+D  L+   +    +  FLL HSIP+
Sbjct: 33  EMQKANYFTFVMLI---NMSPLDTIEGNVTFLMPNDRMLANMVLQEGSISSFLLRHSIPS 89

Query: 63  XXXXXXXXXXXXGXXXXXXXXXXXXXXTNSGRSGLFVNNARIVTPNVCQT-SSIRCHGIS 121
                       G              +N+GR    +NN +I++PN+C   SSIRCHGI 
Sbjct: 90  PMLFDVLEQFPTGTTIPTSLPNCMLRVSNNGRKNYVLNNVKIISPNLCVAGSSIRCHGID 149

Query: 122 AALT 125
             L+
Sbjct: 150 GVLS 153


>Glyma15g12360.1 
          Length = 96

 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 48/63 (76%), Gaps = 6/63 (9%)

Query: 1  MSDMRSRSYYGFVILLKILN--SQPNSLQNNDLTFLMPSDEQLSQFSITPDELHDFLLSH 58
          + DMR++SYYGFV+LL++LN  SQPN     DLTFLMP D++LS  SI+ DE+ +F L H
Sbjct: 19 IGDMRAKSYYGFVMLLQMLNGTSQPN----RDLTFLMPDDKELSASSISTDEVEEFFLKH 74

Query: 59 SIP 61
          ++P
Sbjct: 75 ALP 77