Miyakogusa Predicted Gene

Lj2g3v3088160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3088160.1 tr|B9GFL3|B9GFL3_POPTR Outward rectifying
potassium channel (Fragment) OS=Populus trichocarpa
GN=POP,38.46,3e-19,Voltage-gated potassium channels,NULL; seg,NULL;
Ion_trans_2,Ion transport 2; PROBABLE CALCIUM-ACTIV,gene.g44177.t1.1
         (150 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g45510.1                                                       194   4e-50
Glyma14g03260.1                                                       188   2e-48
Glyma08g08710.1                                                       144   2e-35
Glyma19g40890.1                                                       140   3e-34
Glyma03g38280.1                                                       139   1e-33
Glyma05g25750.1                                                       107   6e-24
Glyma17g01080.1                                                       102   2e-22
Glyma14g01790.1                                                       100   5e-22
Glyma02g46930.1                                                       100   5e-22

>Glyma02g45510.1 
          Length = 329

 Score =  194 bits (492), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 95/129 (73%), Positives = 111/129 (86%), Gaps = 3/129 (2%)

Query: 1   MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
           MRIRTKVCLALAVVIG +AIGTV  H V DL+W DS+YLS+TSVTTVGYGD+SL TV GR
Sbjct: 164 MRIRTKVCLALAVVIGCIAIGTVTVHLVEDLNWDDSIYLSITSVTTVGYGDFSLRTVTGR 223

Query: 61  CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
           CFA +WLLVSTLAVARA++YL +Y++ KRNR+MA+W+LQKKITLSDL AADLDNDGSI  
Sbjct: 224 CFAIIWLLVSTLAVARAFIYLTEYSIHKRNRKMAQWVLQKKITLSDLAAADLDNDGSI-- 281

Query: 121 EEKMNFVPF 129
             K +FV +
Sbjct: 282 -SKSDFVIY 289


>Glyma14g03260.1 
          Length = 321

 Score =  188 bits (477), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 91/127 (71%), Positives = 108/127 (85%)

Query: 1   MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
           MRIRTK CLALAVVI  +AIGTV  H V DL+W DS+YLS+TSVTTVGYGD+SL TV GR
Sbjct: 154 MRIRTKFCLALAVVIDCIAIGTVTVHLVEDLNWDDSIYLSITSVTTVGYGDFSLRTVTGR 213

Query: 61  CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
           CFA +WLLVST AVARA +YL +Y++QKRN +MA+W+LQKKITLSDL AADLDNDGSIR 
Sbjct: 214 CFAIIWLLVSTPAVARASIYLTEYSIQKRNCKMAQWVLQKKITLSDLAAADLDNDGSIRQ 273

Query: 121 EEKMNFV 127
             K++++
Sbjct: 274 RSKIDYL 280


>Glyma08g08710.1 
          Length = 396

 Score =  144 bits (364), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 90/122 (73%)

Query: 1   MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
           MRIR KV LAL VV+    +G    HFV  L W DS YLSV SVTTVGYGD++  T+ GR
Sbjct: 230 MRIRLKVALALGVVVICTGVGVGVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGR 289

Query: 61  CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
            FA++WLLVSTLAVARA+LYLA+  + KR+R MAKWIL + +T+S+ +AAD+DN+G +  
Sbjct: 290 IFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSK 349

Query: 121 EE 122
            E
Sbjct: 350 SE 351


>Glyma19g40890.1 
          Length = 385

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/127 (55%), Positives = 94/127 (74%)

Query: 1   MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
           MRIR KV LAL VV+  + IG++  +FV  LDW DS+YLSV SVTTVGYGD +  T+ GR
Sbjct: 219 MRIRLKVGLALGVVVMCIGIGSLVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGR 278

Query: 61  CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
            FA++WLL STL VARA+LYLA+  + +R+R MAK +L ++IT+ DL+AAD++N G I  
Sbjct: 279 LFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHREITVQDLLAADINNTGFISK 338

Query: 121 EEKMNFV 127
            E + F+
Sbjct: 339 SEYVIFM 345


>Glyma03g38280.1 
          Length = 376

 Score =  139 bits (349), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 92/126 (73%)

Query: 1   MRIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGR 60
           MRIR KV LAL VV+  + IG +  +FV  LDW DS+YLSV SVTTVGYGD +  T+ GR
Sbjct: 210 MRIRLKVGLALGVVVLCIGIGGLVLYFVEGLDWVDSIYLSVMSVTTVGYGDRAFKTLPGR 269

Query: 61  CFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRF 120
            FA++WLL STL VARA+LYLA+  + +R+R MAK +L ++IT+ DL+AAD++N G I  
Sbjct: 270 LFAAIWLLFSTLMVARAFLYLAEARIDRRHRRMAKKVLHREITVEDLLAADINNTGFISK 329

Query: 121 EEKMNF 126
            E + F
Sbjct: 330 SEYVIF 335


>Glyma05g25750.1 
          Length = 382

 Score =  107 bits (266), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 50/84 (59%), Positives = 67/84 (79%)

Query: 39  LSVTSVTTVGYGDYSLTTVAGRCFASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWIL 98
            SV SVTTVGYGD++  T+ GR FA++WLLVSTLAVARA+LYLA+  + KR+R MAKWIL
Sbjct: 254 FSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWIL 313

Query: 99  QKKITLSDLIAADLDNDGSIRFEE 122
            + +T+S+ +AAD+DN+G +   E
Sbjct: 314 GQDMTVSEFLAADIDNNGFVSKSE 337


>Glyma17g01080.1 
          Length = 352

 Score =  102 bits (253), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 78/114 (68%)

Query: 2   RIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRC 61
           + + K  LA +V +  +  GT+  H++ +LD+ D+LY   ++VTT+GYGD S +T  GR 
Sbjct: 184 KAKYKFILAASVFLVLMISGTIFLHYIENLDFVDALYCVCSTVTTLGYGDKSFSTTIGRA 243

Query: 62  FASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDND 115
           FA  W+L ST+ +A+++ YLA++  ++R + MAK +L +K++L DL AADLD D
Sbjct: 244 FAVFWILSSTICLAQSFAYLAEFYTEERQKAMAKIVLTRKLSLLDLEAADLDGD 297


>Glyma14g01790.1 
          Length = 348

 Score =  100 bits (250), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 69/102 (67%)

Query: 21  GTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRCFASLWLLVSTLAVARAYLY 80
           GT+    V  LD  D+ Y   +++TT+GYGD S +T AGR FA  W+L  T+ +A+ +LY
Sbjct: 201 GTIFLVTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAGRIFAVFWILTGTITLAQLFLY 260

Query: 81  LADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSIRFEE 122
           +A+ N + R +E+ KW+L +K+T SDL AADLD DG++R  E
Sbjct: 261 IAELNTEIRQKELVKWVLTRKVTNSDLEAADLDVDGTVRAAE 302


>Glyma02g46930.1 
          Length = 349

 Score =  100 bits (249), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 77/117 (65%)

Query: 2   RIRTKVCLALAVVIGRVAIGTVASHFVGDLDWADSLYLSVTSVTTVGYGDYSLTTVAGRC 61
           + R K+ L  ++++  + +GT+    V  LD  D+ Y   +++TT+GYGD S +T AGR 
Sbjct: 183 KTRYKLFLVFSLLLILIIVGTIFLVTVEKLDVIDAFYCVCSTITTLGYGDQSFSTQAGRI 242

Query: 62  FASLWLLVSTLAVARAYLYLADYNMQKRNREMAKWILQKKITLSDLIAADLDNDGSI 118
           FA  W+L  T+ +A+ ++Y+A+ N + R +E+ KW+L +K+T  DL AADLD DG++
Sbjct: 243 FAVFWILTGTITLAQLFVYIAELNTEIRQKELVKWVLTRKVTNLDLEAADLDEDGTV 299