Miyakogusa Predicted Gene

Lj2g3v1550140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1550140.1 Non Chatacterized Hit- tr|F6HJ40|F6HJ40_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,44.83,0.0006,seg,NULL,CUFF.37418.1
         (136 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g35460.1                                                       125   2e-29
Glyma09g35030.1                                                       106   6e-24

>Glyma01g35460.1 
          Length = 158

 Score =  125 bits (313), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/140 (53%), Positives = 86/140 (61%), Gaps = 13/140 (9%)

Query: 1   MASVQLVSDVRCQSLIHCAASYGERGSVLSLSHRRNHGYRRISNCGGGGVCTEGNFKEHN 60
           MAS Q  S+VRC  L+HCAASYGERG+  SLSHR+N+GY R           E NF+EH+
Sbjct: 28  MAS-QFASEVRCMKLMHCAASYGERGNRCSLSHRQNYGYHRFQP-------EEWNFREHH 79

Query: 61  N---IMEQGKDAKHSTTX-XXXXXXXXXXXFSYLASSFLYMLTKVKALYNGFPSSGGGES 116
           N    M   K  K  T              FSYLASSFLY++ KVKA YNGF     GE+
Sbjct: 80  NNNKTMGCEKGPKRGTNRGRQQAQKLHRFGFSYLASSFLYLVIKVKAFYNGFLGDVAGEA 139

Query: 117 RMGIEAPKAEAYFSVPVLPN 136
           +MGIEAP  EAYFSVPVLPN
Sbjct: 140 KMGIEAP-TEAYFSVPVLPN 158


>Glyma09g35030.1 
          Length = 132

 Score =  106 bits (265), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 80/147 (54%), Gaps = 26/147 (17%)

Query: 1   MASVQLVSDVRCQSLIHCAASYGERGSVLSLSHRRNHGYRRISNCGGGGV---------- 50
           MAS Q   DV+C+ L+HCAASYGERGS  SLS R+N+GY  I                  
Sbjct: 1   MAS-QFARDVKCKRLMHCAASYGERGSHCSLSRRQNYGYHPIQPEEENFNEHHNHNNNNL 59

Query: 51  -CTEGNFKEHNNIMEQGKDAKHSTTXXXXXXXXXXXXFSYLASSFLYMLTKVKALYNGFP 109
            C  G  +  N   +Q +                   FSYLASSFLY++ KVKA YNGF 
Sbjct: 60  GCENGAKRGTNRGRQQAQKLHR-------------LGFSYLASSFLYLVIKVKAFYNGFL 106

Query: 110 SSGGGESRMGIEAPKAEAYFSVPVLPN 136
               GE++MGIEAP  EAYFSVPVLPN
Sbjct: 107 GDVTGEAKMGIEAP-TEAYFSVPVLPN 132