Miyakogusa Predicted Gene

Lj2g3v1119550.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1119550.1 Non Chatacterized Hit- tr|I1MEN1|I1MEN1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57429
PE,81.03,0,GCD14,tRNA (adenine(58)-N(1))-methyltransferase catalytic
subunit GCD14; SUBFAMILY NOT NAMED,NULL; U,CUFF.36282.1
         (309 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g08460.1                                                       491   e-139
Glyma13g30820.1                                                       489   e-138
Glyma13g30820.2                                                       387   e-108
Glyma10g30500.1                                                        93   4e-19
Glyma10g09560.1                                                        55   8e-08

>Glyma15g08460.1 
          Length = 308

 Score =  491 bits (1263), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 240/311 (77%), Positives = 266/311 (85%), Gaps = 5/311 (1%)

Query: 1   MLAGDPAKRISFNRCIRNGDLVIVYERHDSMKAVTVAEGSVLQNRFGVFKYSDWIGKPFG 60
           ML+  PAK++SFNR I NGDLVIVYERHD MKAVTV EGSVLQNRFGVFK+SDWIGKPFG
Sbjct: 1   MLSLHPAKKLSFNRSISNGDLVIVYERHDIMKAVTVCEGSVLQNRFGVFKHSDWIGKPFG 60

Query: 61  SKVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVMYLEIVPGCLVXXXXXXXX 120
           SKVFS KGGFVYLLAPTPELWTLVL+HRTQILYIADISFV+MYLEIVPGC+V        
Sbjct: 61  SKVFSCKGGFVYLLAPTPELWTLVLNHRTQILYIADISFVIMYLEIVPGCVVLESGTGSG 120

Query: 121 XXXXXXARAVAPAGHVHTFDFHEQRAASARDDFQRTGLSNLVRVGVRDIQGQGFPDDFAG 180
                 ARAVAP+GHV+TFDFHEQRAASAR DF+RTGLS+LV V VRDIQG+GFPDD  G
Sbjct: 121 SLTSSLARAVAPSGHVYTFDFHEQRAASARADFERTGLSSLVTVQVRDIQGEGFPDDLTG 180

Query: 181 LADAVFLDLPQPWLAIPSAAKMLKQDGTLCSFSPCIEQVQRSCETLRTSFTDIRTFEVLL 240
           +AD+VFLDLPQPWLAIP+AAK+L+ DGTLCSFSPCIEQVQR+CETLRT FTD RTFEVLL
Sbjct: 181 MADSVFLDLPQPWLAIPAAAKVLRHDGTLCSFSPCIEQVQRTCETLRTRFTDTRTFEVLL 240

Query: 241 RTYEVGEGKMERLQENGKGSNGSLPCKRRQCSDGGYVLSS--NISSVVAKPCGEARGHTG 298
           RTYEV E KM+ L  +   SNGS+P KR+QCS G YVL S  + SSV+A+PCGEARGHTG
Sbjct: 241 RTYEVREEKMQSLCGD---SNGSVPSKRKQCSGGSYVLGSSPSTSSVMARPCGEARGHTG 297

Query: 299 YLTFARLKCLS 309
           YLTFAR+K LS
Sbjct: 298 YLTFARVKSLS 308


>Glyma13g30820.1 
          Length = 309

 Score =  489 bits (1258), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/312 (78%), Positives = 269/312 (86%), Gaps = 6/312 (1%)

Query: 1   MLAGDPAKRISFNRCIRNGDLVIVYERHDSMKAVTVAEGSVLQNRFGVFKYSDWIGKPFG 60
           MLA  PAK++SFNR I NGDLVIVYERHD MKAVTV+EGSVLQNRFGVFK+S+WIGKPFG
Sbjct: 1   MLALHPAKKLSFNRPINNGDLVIVYERHDIMKAVTVSEGSVLQNRFGVFKHSEWIGKPFG 60

Query: 61  SKVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVMYLEIVPGCLVXXXXXXXX 120
           SKV S+KGGFVYLLAPTPELWTLVL+HRTQILYIADISFV+MYLEIVPGC+V        
Sbjct: 61  SKVVSSKGGFVYLLAPTPELWTLVLNHRTQILYIADISFVIMYLEIVPGCVVLESGTGSG 120

Query: 121 XXXXXXARAVAPAGHVHTFDFHEQRAASARDDFQRTGLSNLVRVGVRDIQGQGFPDDFAG 180
                 ARAVAP+GHV+TFDFHEQRAASAR DF+RTGLS+LV V VRDIQG+GFPD F G
Sbjct: 121 SLTTSLARAVAPSGHVYTFDFHEQRAASARADFERTGLSSLVTVQVRDIQGEGFPDTFTG 180

Query: 181 LADAVFLDLPQPWLAIPSAAKMLKQDGTLCSFSPCIEQVQRSCETLRTSFTDIRTFEVLL 240
           +AD+VFLDLPQPWL IPSAAK+L+ DGTLCSFSPCIEQVQR+CETLRT FTDIRTFEVLL
Sbjct: 181 MADSVFLDLPQPWLVIPSAAKVLRHDGTLCSFSPCIEQVQRTCETLRTCFTDIRTFEVLL 240

Query: 241 RTYEVGEGKMERLQENGKGSNGSLPCKRRQCSDGGYVL---SSNISSVVAKPCGEARGHT 297
           RTYEV E KM+ L  +G   NGSLP KRRQCSDG YVL   S +ISSV+A+PCGEARGHT
Sbjct: 241 RTYEVREEKMQSLCGDG---NGSLPSKRRQCSDGSYVLSSSSPSISSVMARPCGEARGHT 297

Query: 298 GYLTFARLKCLS 309
           GYLTFAR+K LS
Sbjct: 298 GYLTFARVKSLS 309


>Glyma13g30820.2 
          Length = 267

 Score =  387 bits (994), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/236 (78%), Positives = 204/236 (86%)

Query: 1   MLAGDPAKRISFNRCIRNGDLVIVYERHDSMKAVTVAEGSVLQNRFGVFKYSDWIGKPFG 60
           MLA  PAK++SFNR I NGDLVIVYERHD MKAVTV+EGSVLQNRFGVFK+S+WIGKPFG
Sbjct: 1   MLALHPAKKLSFNRPINNGDLVIVYERHDIMKAVTVSEGSVLQNRFGVFKHSEWIGKPFG 60

Query: 61  SKVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVMYLEIVPGCLVXXXXXXXX 120
           SKV S+KGGFVYLLAPTPELWTLVL+HRTQILYIADISFV+MYLEIVPGC+V        
Sbjct: 61  SKVVSSKGGFVYLLAPTPELWTLVLNHRTQILYIADISFVIMYLEIVPGCVVLESGTGSG 120

Query: 121 XXXXXXARAVAPAGHVHTFDFHEQRAASARDDFQRTGLSNLVRVGVRDIQGQGFPDDFAG 180
                 ARAVAP+GHV+TFDFHEQRAASAR DF+RTGLS+LV V VRDIQG+GFPD F G
Sbjct: 121 SLTTSLARAVAPSGHVYTFDFHEQRAASARADFERTGLSSLVTVQVRDIQGEGFPDTFTG 180

Query: 181 LADAVFLDLPQPWLAIPSAAKMLKQDGTLCSFSPCIEQVQRSCETLRTSFTDIRTF 236
           +AD+VFLDLPQPWL IPSAAK+L+ DGTLCSFSPCIEQVQR+CETLRT FT    F
Sbjct: 181 MADSVFLDLPQPWLVIPSAAKVLRHDGTLCSFSPCIEQVQRTCETLRTCFTGSSVF 236


>Glyma10g30500.1 
          Length = 204

 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/73 (61%), Positives = 53/73 (72%)

Query: 78  PELWTLVLSHRTQILYIADISFVVMYLEIVPGCLVXXXXXXXXXXXXXXARAVAPAGHVH 137
           P +  LVL+H+TQILYIADI FV+MYLEIVPGCLV              ARA + +GHV+
Sbjct: 3   PTIVDLVLNHKTQILYIADIIFVIMYLEIVPGCLVLESGARSGSLTTSLARAFSLSGHVY 62

Query: 138 TFDFHEQRAASAR 150
           TFDFHEQRA+SAR
Sbjct: 63  TFDFHEQRASSAR 75


>Glyma10g09560.1 
          Length = 49

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/48 (56%), Positives = 32/48 (66%)

Query: 102 MYLEIVPGCLVXXXXXXXXXXXXXXARAVAPAGHVHTFDFHEQRAASA 149
           MYLEIV GC+V              ARA+AP+G V+TFDFHEQRA+SA
Sbjct: 1   MYLEIVLGCVVLEFGARSGYLTASHARAIAPSGLVYTFDFHEQRASSA 48