Miyakogusa Predicted Gene
- Lj2g3v0889170.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v0889170.1 Non Chatacterized Hit- tr|I1J4H3|I1J4H3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.879
PE=4,82.71,0,seg,NULL; no description,NULL; no description,Transferrin
receptor-like, dimerisation domain; Transf,CUFF.35694.1
(215 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g01000.1 365 e-101
Glyma01g01000.2 189 3e-48
Glyma10g11100.1 186 1e-47
Glyma03g36430.1 174 5e-44
Glyma19g39080.1 147 7e-36
Glyma04g15870.1 55 8e-08
>Glyma01g01000.1
Length = 708
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/215 (80%), Positives = 190/215 (88%)
Query: 1 MYEXXXXXXXXPLIGRLGGAGSDYAAFLQHVGIPAADIAFGGDSATYPVYHSLYDDFIWM 60
+YE PL GRLGG GSDYA+FLQHVGIPAADIAFGGD A YPVYHSLYDDF+WM
Sbjct: 460 IYESWTSSGSSPLFGRLGGGGSDYASFLQHVGIPAADIAFGGDVAGYPVYHSLYDDFVWM 519
Query: 61 QKFGDPMFQRHVAAASVWGLVALWLADEEFIPFDYVSYAKELQLSVKVLENEISSKDINL 120
+KFGDPMFQRHVAAASVWGLVALWLADEEF+PFDY+SYAKELQLSV+ LE+EIS+KDINL
Sbjct: 520 EKFGDPMFQRHVAAASVWGLVALWLADEEFLPFDYLSYAKELQLSVENLEDEISNKDINL 579
Query: 121 TPMFTSIKELEKAATMIKNQRKELAASKGWTTRKENHLKVRELNDRLMMAERAFTDRDGL 180
+P+F SIK LEKAA I +QRKE+ A KGW T K++HL+VRELNDRLMMAERAFTDRDGL
Sbjct: 580 SPIFKSIKGLEKAAIKIDSQRKEIEAGKGWITGKKDHLRVRELNDRLMMAERAFTDRDGL 639
Query: 181 FGMSWYKHLIYGRSKHNGYGSQSFPGIDDAVIIAK 215
FGMSWYKHLIYG SKHN YGSQSFPGIDDAV +AK
Sbjct: 640 FGMSWYKHLIYGPSKHNDYGSQSFPGIDDAVKMAK 674
>Glyma01g01000.2
Length = 570
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 85/109 (77%), Positives = 95/109 (87%)
Query: 1 MYEXXXXXXXXPLIGRLGGAGSDYAAFLQHVGIPAADIAFGGDSATYPVYHSLYDDFIWM 60
+YE PL GRLGG GSDYA+FLQHVGIPAADIAFGGD A YPVYHSLYDDF+WM
Sbjct: 460 IYESWTSSGSSPLFGRLGGGGSDYASFLQHVGIPAADIAFGGDVAGYPVYHSLYDDFVWM 519
Query: 61 QKFGDPMFQRHVAAASVWGLVALWLADEEFIPFDYVSYAKELQLSVKVL 109
+KFGDPMFQRHVAAASVWGLVALWLADEEF+PFDY+SYAKELQ+ ++ +
Sbjct: 520 EKFGDPMFQRHVAAASVWGLVALWLADEEFLPFDYLSYAKELQVCLQFI 568
>Glyma10g11100.1
Length = 704
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 128/200 (64%), Gaps = 6/200 (3%)
Query: 12 PLIGRLGGAGSDYAAFLQHVGIPAADIAFGGDSATYPVYHSLYDDFIWMQKFGDPMFQRH 71
P+I RL G SD+A F+QH G+P+ D+ +G D YPVYH+ +D + WM KFGDP FQRH
Sbjct: 473 PMIQRLSGVDSDFAPFVQHAGVPSVDVYYGKD---YPVYHTAFDSYNWMTKFGDPFFQRH 529
Query: 72 VAAASVWGLVALWLADEEFIPFDYVSYAKELQLSVKVLENEISSKDINLTPMFTSIKELE 131
A +WGL+AL LAD+ IPF+Y+SYA +LQ+ +L N + K I L P+ TSI+E
Sbjct: 530 EAVTGIWGLLALRLADDSIIPFNYLSYANQLQVYNNILSN-LLDKQITLHPLNTSIQEFA 588
Query: 132 KAATMIKNQRKELAASKGWTTRKENHLKVRELNDRLMMAERAFTDRDGLFGMSWYKHLIY 191
AA ++ K+L + + + +K+R LNDRLM+AER F D DGL G W+KHL++
Sbjct: 589 SAAKEANDESKKLKWQEA--SDRSIDMKMRALNDRLMLAERGFLDVDGLQGRQWFKHLVF 646
Query: 192 GRSKHNGYGSQSFPGIDDAV 211
G + FPGI D++
Sbjct: 647 GPPSDHESKLDFFPGIADSL 666
>Glyma03g36430.1
Length = 694
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 125/201 (62%), Gaps = 7/201 (3%)
Query: 14 IGRLGGAGSDYAAFLQHVGIPAADIAFGGDSATYPVYHSLYDDFIWMQKFGDPMFQRHVA 73
I RL G SD+A F+QH G+P+ D+ +G D +PVYH+ +D + WM ++GDP F RHVA
Sbjct: 466 IQRLSGVDSDFAPFVQHAGVPSIDMYYGRD---FPVYHTAFDSYNWMAEYGDPFFHRHVA 522
Query: 74 AASVWGLVALWLADEEFIPFDYVSYAKELQLSVKVLENEISSKDINLTPMFTSIKELEKA 133
VWGL+AL LAD+ +PF+YVSYA ELQL L N I K I+L P+ SI+E A
Sbjct: 523 VTGVWGLLALHLADDPILPFNYVSYANELQLYKNTLSNLIDQK-ISLHPLTLSIEEFASA 581
Query: 134 ATMIKNQRKELAASKGWTTRKENHLKVRELNDRLMMAERAFTDRDGLFGMSWYKHLIYGR 193
A ++ K+L + T +K R LNDRLM+AE+ F D DGL G W+KHL++G
Sbjct: 582 AKEADDEIKKLRLQE--TEGCFVDMKKRALNDRLMLAEKGFLDADGLQGKQWFKHLVFGP 639
Query: 194 SKHNGYGSQSFPGIDDAVIIA 214
S + FPGI D+ I +
Sbjct: 640 SSDHER-INFFPGISDSTITS 659
>Glyma19g39080.1
Length = 645
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 112/198 (56%), Gaps = 40/198 (20%)
Query: 14 IGRLGGAGSDYAAFLQHVGIPAADIAFGGDSATYPVYHSLYDDFIWMQKFGDPMFQRHVA 73
I RL G SD+A F+QH G+P+ D+ +G D +PVYH+ +D + WM ++GDP F RHVA
Sbjct: 450 IQRLSGVDSDFAPFVQHAGVPSIDMYYGRD---FPVYHTAFDSYNWMAEYGDPFFHRHVA 506
Query: 74 AASVWGLVALWLADEEFIPFDYVSYAKELQLSVKVLENEISSKDINLTPMFTSIKELEKA 133
VWGL+AL LAD+ +PF+YV YA ELQL +L ++I LT M +
Sbjct: 507 VTGVWGLLALHLADDPVLPFNYVPYANELQL---ILVSDI------LTCMEVAFI----- 552
Query: 134 ATMIKNQRKELAASKGWTTRKENHLKVRELNDRLMMAERAFTDRDGLFGMSWYKHLIYGR 193
+++K R LNDRLM+AE+ F D DGL G W+KHL++G
Sbjct: 553 ----------------------SYMKKRALNDRLMLAEKGFLDADGLQGRQWFKHLVFGP 590
Query: 194 SKHNGYGSQSFPGIDDAV 211
S N FPGI D++
Sbjct: 591 SS-NHEKLNFFPGISDSI 607
>Glyma04g15870.1
Length = 81
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 116 KDINLTPMFTSIKELEKAATMIKNQRKELAASKGWTTRKENHLKVRELNDRLMMAERAFT 175
K I++ P+ TSI+E A ++ K+L + T+ + +K+R LNDRLM+AER F
Sbjct: 10 KQISIHPLNTSIQEFASVAKQANDESKKLRLQE--TSDRSIDMKMRALNDRLMLAERGFL 67
Query: 176 DRDGLFGMSWYKH 188
D DGL W+ H
Sbjct: 68 DVDGLQERQWFNH 80