Miyakogusa Predicted Gene

Lj1g3v4919790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4919790.1 tr|F4J7C4|F4J7C4_ARATH F-actin-capping protein
subunit alpha OS=Arabidopsis thaliana GN=At3g05520
PE,61.9,5e-17,F-actin_cap_A,WASH complex, F-actin capping protein,
alpha subunit; F-ACTIN-CAPPING PROTEIN SUBUNIT ,CUFF.33600.1
         (77 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g39530.1                                                       124   2e-29
Glyma19g42150.1                                                       117   2e-27

>Glyma03g39530.1 
          Length = 305

 Score =  124 bits (311), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 57/67 (85%), Positives = 63/67 (94%)

Query: 11 LSDKQKVEIAKWFLLNSPPGEIQYVAKDVKSILNNDDLFNEAATEAFPVYNLTHLISLQL 70
          LSDKQKVEIAKWFLLNSPPGEIQYVAKDVKSILNNDDL+ EAA+EAFP YN +HLIS+ +
Sbjct: 10 LSDKQKVEIAKWFLLNSPPGEIQYVAKDVKSILNNDDLYKEAASEAFPYYNKSHLISIPM 69

Query: 71 PNRTGDV 77
          PNR+GDV
Sbjct: 70 PNRSGDV 76


>Glyma19g42150.1 
          Length = 307

 Score =  117 bits (294), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 56/67 (83%), Positives = 61/67 (91%)

Query: 11 LSDKQKVEIAKWFLLNSPPGEIQYVAKDVKSILNNDDLFNEAATEAFPVYNLTHLISLQL 70
          LSDKQKVEIAKWFLLNSPPGEIQYVAKDVKSILNNDDL+ EAA+EAF  YN +HLISL +
Sbjct: 12 LSDKQKVEIAKWFLLNSPPGEIQYVAKDVKSILNNDDLYKEAASEAFLFYNKSHLISLPM 71

Query: 71 PNRTGDV 77
           NR+GDV
Sbjct: 72 SNRSGDV 78