Miyakogusa Predicted Gene
- Lj1g3v4898010.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v4898010.2 Non Chatacterized Hit- tr|H2MUX6|H2MUX6_ORYLA
Uncharacterized protein OS=Oryzias latipes GN=WDR89
PE,31.17,3e-18,WD40,WD40 repeat; WD40
repeat-like,WD40-repeat-containing domain; WD_REPEATS_2,WD40 repeat;
WD_REPEA,CUFF.33544.2
(284 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g39790.1 520 e-147
Glyma03g37180.1 517 e-147
Glyma13g30230.2 54 1e-07
Glyma13g30230.1 54 1e-07
Glyma16g27980.1 53 3e-07
Glyma02g08880.1 52 1e-06
Glyma09g10290.1 50 3e-06
Glyma15g22450.1 49 4e-06
Glyma10g03260.1 49 6e-06
Glyma02g34620.1 49 7e-06
Glyma17g02820.1 48 1e-05
>Glyma19g39790.1
Length = 389
Score = 520 bits (1338), Expect = e-147, Method: Compositional matrix adjust.
Identities = 244/284 (85%), Positives = 267/284 (94%), Gaps = 1/284 (0%)
Query: 1 METSTAMDIEEQPSPPTPNNVKRFGLKNSIQTNFGDDYVFQIIPKDDWTAMAVSLSTNAV 60
METS AMD+EEQPSP ++VKRFGLKNSIQTNFGDDYVFQI+P DDW+AMAVSLSTNAV
Sbjct: 1 METSAAMDVEEQPSP-NASDVKRFGLKNSIQTNFGDDYVFQIVPNDDWSAMAVSLSTNAV 59
Query: 61 KLYSPVAGQYYGDFKGHSSTINQILFSGPSNPHVLNSCSSDGTIRAWDTRTFQQVSTIDA 120
KLYSPVAGQYYG+ KGHS TINQILFSGPSNPHVL SCSSDGTIRAWD RTFQQVS+I+A
Sbjct: 60 KLYSPVAGQYYGECKGHSETINQILFSGPSNPHVLCSCSSDGTIRAWDIRTFQQVSSINA 119
Query: 121 GPSQEVFSISLGGPNGNLIAAGCKSKILFWDWRNRKQIACLEDSHVEDVTQVHFVPDERG 180
GPSQEVFS +GG GNL+AAGCKS+ILFWDWRN KQ+ACLEDSHV+DVTQVHFVP+E+G
Sbjct: 120 GPSQEVFSFCIGGTGGNLVAAGCKSQILFWDWRNMKQVACLEDSHVDDVTQVHFVPNEQG 179
Query: 181 KLISASEDGLICTFDTTGDINDDDHLESVINVGTSIAKVGLFGESYQKLWCLTHIETLGV 240
KLISAS DGLICTFD TGDINDDDHLESVIN+GTSIAKVG+FGE+YQKLWCLTHIETLG+
Sbjct: 180 KLISASVDGLICTFDATGDINDDDHLESVINMGTSIAKVGIFGENYQKLWCLTHIETLGI 239
Query: 241 WDWKDGRNEVNFSDARTLASESWNLDHVDYFVDCHYSKEAEKLW 284
W+WKDGRNE NFSDART+ASESWNLDHVDYF+DCHYS+EAEKLW
Sbjct: 240 WNWKDGRNEGNFSDARTIASESWNLDHVDYFIDCHYSREAEKLW 283
>Glyma03g37180.1
Length = 389
Score = 517 bits (1332), Expect = e-147, Method: Compositional matrix adjust.
Identities = 240/284 (84%), Positives = 268/284 (94%), Gaps = 1/284 (0%)
Query: 1 METSTAMDIEEQPSPPTPNNVKRFGLKNSIQTNFGDDYVFQIIPKDDWTAMAVSLSTNAV 60
METS AMD+E+QPSP + NNVKRFGLKNSIQTNFGDDYVFQI+PK+DW+AMAVSLSTNAV
Sbjct: 1 METSAAMDVEDQPSPNS-NNVKRFGLKNSIQTNFGDDYVFQIVPKEDWSAMAVSLSTNAV 59
Query: 61 KLYSPVAGQYYGDFKGHSSTINQILFSGPSNPHVLNSCSSDGTIRAWDTRTFQQVSTIDA 120
KLYSPVAGQY+G+FKGHS T+NQI FSGPSNPH+L SCSSDGTIRAWD RTFQQVS+I+A
Sbjct: 60 KLYSPVAGQYFGEFKGHSETVNQISFSGPSNPHILCSCSSDGTIRAWDARTFQQVSSINA 119
Query: 121 GPSQEVFSISLGGPNGNLIAAGCKSKILFWDWRNRKQIACLEDSHVEDVTQVHFVPDERG 180
GPSQEVFS +GG +GNL+AAGCKS++LFWDWRN KQ+ACL DSHV+DVTQVHFVP+ERG
Sbjct: 120 GPSQEVFSFCMGGTSGNLVAAGCKSQVLFWDWRNMKQVACLVDSHVDDVTQVHFVPNERG 179
Query: 181 KLISASEDGLICTFDTTGDINDDDHLESVINVGTSIAKVGLFGESYQKLWCLTHIETLGV 240
KLISAS DGLICTFDTTGDINDDDHLESVIN+GTSIAKVG+FGE++QKLWCLTHIETLG+
Sbjct: 180 KLISASVDGLICTFDTTGDINDDDHLESVINMGTSIAKVGIFGETFQKLWCLTHIETLGI 239
Query: 241 WDWKDGRNEVNFSDARTLASESWNLDHVDYFVDCHYSKEAEKLW 284
W+WKDG NE NF DARTLASESWNLDHVDYF+DCHYS+EAEKLW
Sbjct: 240 WNWKDGSNEGNFLDARTLASESWNLDHVDYFIDCHYSREAEKLW 283
>Glyma13g30230.2
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 15 PPTPNNVKRFGLKNSIQTNFGDDYVFQIIPKDDWTAMAVSLSTNAVKLYSPVAGQYYGDF 74
PPT N ++ F +++ + + D + + +D + + S + VKL++ F
Sbjct: 94 PPTSNPIRSFQ-EHTREVHSAD---YNPVRRDSFLS---SSWDDTVKLWTLDRPTSVRTF 146
Query: 75 KGHSSTINQILFSGPSNPHVLNSCSSDGTIRAWDTRTFQQVSTIDAGPSQEVFSISLGGP 134
K H+ + +++ P + V S S D T+R WD R + A E+ +
Sbjct: 147 KEHAYCVYSAVWN-PRHADVFASASGDCTLRVWDVREPGSTMILPAH-EFEILACDWNKY 204
Query: 135 NGNLIA-AGCKSKILFWDWRNRKQIACLEDSHVEDVTQVHFVPDERGKLISASEDGLICT 193
+ +IA A + WD RN + C+ + H V +V F P R ++S S D +C
Sbjct: 205 DECVIATASVDKSVKVWDVRNYRVPLCVLNGHGYAVRKVKFSPHVRNLMVSCSYDMTVCV 264
Query: 194 FDTTGD----INDDDHLESVINVGTSIAKVGLFGES 225
+D + D H E + V S+ GL +
Sbjct: 265 WDFMVEDALVSRYDHHTEFAVGVDMSVLVEGLMAST 300
>Glyma13g30230.1
Length = 318
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 14/216 (6%)
Query: 15 PPTPNNVKRFGLKNSIQTNFGDDYVFQIIPKDDWTAMAVSLSTNAVKLYSPVAGQYYGDF 74
PPT N ++ F +++ + + D + + +D + + S + VKL++ F
Sbjct: 94 PPTSNPIRSFQ-EHTREVHSAD---YNPVRRDSFLS---SSWDDTVKLWTLDRPTSVRTF 146
Query: 75 KGHSSTINQILFSGPSNPHVLNSCSSDGTIRAWDTRTFQQVSTIDAGPSQEVFSISLGGP 134
K H+ + +++ P + V S S D T+R WD R + A E+ +
Sbjct: 147 KEHAYCVYSAVWN-PRHADVFASASGDCTLRVWDVREPGSTMILPAH-EFEILACDWNKY 204
Query: 135 NGNLIA-AGCKSKILFWDWRNRKQIACLEDSHVEDVTQVHFVPDERGKLISASEDGLICT 193
+ +IA A + WD RN + C+ + H V +V F P R ++S S D +C
Sbjct: 205 DECVIATASVDKSVKVWDVRNYRVPLCVLNGHGYAVRKVKFSPHVRNLMVSCSYDMTVCV 264
Query: 194 FDTTGD----INDDDHLESVINVGTSIAKVGLFGES 225
+D + D H E + V S+ GL +
Sbjct: 265 WDFMVEDALVSRYDHHTEFAVGVDMSVLVEGLMAST 300
>Glyma16g27980.1
Length = 480
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 44 PKDDWTAMAVSLSTNAVKLYSPVAGQYYGDFKGHSSTINQILFSGPSNPHVLNSCSSDGT 103
P W A A +VKL++ G++ F+GH + QI +S S +L S S D T
Sbjct: 377 PDGQWVASASF--DKSVKLWNGTTGKFVAAFRGHVGPVYQISWSADS--RLLLSGSKDST 432
Query: 104 IRAWDTRTFQQVSTIDAGPSQEVFSISLGGPNGNLIAAGCKSKIL 148
++ WD RT +++ G S EVFS+ P+G +A+G K K+L
Sbjct: 433 LKVWDIRT-RKLKQDLPGHSDEVFSVDW-SPDGEKVASGGKDKVL 475
>Glyma02g08880.1
Length = 480
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Query: 44 PKDDWTAMAVSLSTNAVKLYSPVAGQYYGDFKGHSSTINQILFSGPSNPHVLNSCSSDGT 103
P W A A +VKL++ G++ F+GH + QI +S S +L S S D T
Sbjct: 377 PDGQWVASASF--DKSVKLWNGTTGKFVTAFRGHVGPVYQISWSADSR--LLLSGSKDST 432
Query: 104 IRAWDTRTFQQVSTIDAGPSQEVFSISLGGPNGNLIAAGCKSKIL 148
++ WD RT +++ G + EVFS+ P+G +A+G K K+L
Sbjct: 433 LKVWDIRT-RKLKQDLPGHADEVFSVDW-SPDGEKVASGGKDKVL 475
>Glyma09g10290.1
Length = 904
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 89/218 (40%), Gaps = 18/218 (8%)
Query: 47 DWTAMAVSLSTNAVKLYSPVAGQYYGDFKGHSSTINQILFSGPSNPHVLNSCSSDGTIRA 106
D +A N VK+++ +G + F H++ + + F PSN +VL S S DGTIRA
Sbjct: 404 DSQLLATGADDNKVKVWTLSSGFCFVTFSEHTNAVTALHFM-PSN-NVLLSASLDGTIRA 461
Query: 107 WDTRTFQQVSTIDAGPSQEVFSISLGGPNGNLIAAGCKS--KILFWDWRNRKQIACLEDS 164
WD ++ T PS F +G +I AG ++ W + + + L
Sbjct: 462 WDLLRYRNFKTFTT-PSPRQFVSLTADISGEVICAGTSDSFEVFVWSMKTGRLMDVLS-G 519
Query: 165 HVEDVTQVHFVPDERGKLISASEDGLIC---TFDTTGDINDDDHLESVINVGTSIAKVGL 221
H V + F P L S+S D + FD G + H V+ V +
Sbjct: 520 HEAPVHGLVFSPTN-AVLASSSYDKTVRLWNVFDGKGAVETFPHTHDVLTV--------V 570
Query: 222 FGESYQKLWCLTHIETLGVWDWKDGRNEVNFSDARTLA 259
+ ++L C T + WD DG +R +A
Sbjct: 571 YRPDGRQLACSTLDGQIHFWDPIDGLLMYTIEGSRDIA 608
>Glyma15g22450.1
Length = 680
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 18/218 (8%)
Query: 47 DWTAMAVSLSTNAVKLYSPVAGQYYGDFKGHSSTINQILFSGPSNPHVLNSCSSDGTIRA 106
D +A N VK+++ +G + F H++ I + F PSN +VL S S DGTIRA
Sbjct: 398 DSQLLATGADDNKVKVWTLSSGFCFVTFSEHTNAITALHFI-PSN-NVLLSASLDGTIRA 455
Query: 107 WDTRTFQQVSTIDAGPSQEVFSISLGGPNGNLIAAGCKS--KILFWDWRNRKQIACLEDS 164
WD ++ T PS F +G +I AG ++ W + + + L
Sbjct: 456 WDLLRYRNFKTFTT-PSPRQFVSLTADISGEVICAGTSDSFEVFVWSMKTGRLMDVLS-G 513
Query: 165 HVEDVTQVHFVPDERGKLISASEDGLIC---TFDTTGDINDDDHLESVINVGTSIAKVGL 221
H V + F P L S+S D + FD G + H V+ V +
Sbjct: 514 HEAPVHGLVFSPTNT-VLASSSYDKTVRLWNVFDGKGAVETFPHTHDVLTV--------V 564
Query: 222 FGESYQKLWCLTHIETLGVWDWKDGRNEVNFSDARTLA 259
+ ++L C T + WD DG +R +A
Sbjct: 565 YRPDGRQLACSTLDGQIHFWDPIDGLLMYTIEGSRDIA 602
>Glyma10g03260.1
Length = 319
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 10/173 (5%)
Query: 76 GHSSTINQILFSGPSNPHVLNSCSSDGTIRAWDTRTFQQVSTIDAGPSQEVFSISLGGPN 135
GHS I+ + +S S+ H + S S D T+R WD I G VF ++ +
Sbjct: 70 GHSEGISDLAWS--SDSHYICSASDDRTLRIWDATVGGGCIKILRGHDDAVFCVNFNPQS 127
Query: 136 GNLIAAGCKSKILFWDWRNRKQIACLEDSHVEDVTQVHFVPDERGKLISASEDGLICTFD 195
+++ I WD + K + ++ H VT VH+ D +ISAS DG +D
Sbjct: 128 SYIVSGSFDETIKVWDVKTGKCVHTIK-GHTMPVTSVHYNRDGN-LIISASHDGSCKIWD 185
Query: 196 T-TGDINDDDHLESVINVGTSIAKVGLFGESYQKLWCLTHIETLGVWDWKDGR 247
T TG++ L+++I F + + + T +TL +W++ G+
Sbjct: 186 TETGNL-----LKTLIEDKAPAVSFAKFSPNGKLILAATLNDTLKLWNYGSGK 233
>Glyma02g34620.1
Length = 570
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 75 KGHSSTINQILFSGPSNPHVLNSCSSDGTIRAWDTRTFQQVSTIDAGPSQEVFSISLGGP 134
+GHS ++ + F ++ + SC D R WD RT + + ++ G + V SIS P
Sbjct: 400 EGHSRSVYGLAFH--NDGSLAASCGLDSLARVWDLRTGRSILALE-GHVKPVLSISF-SP 455
Query: 135 NGNLIAAGCK-SKILFWDWRNRKQIACLEDSHVEDVTQVHFVPDERGKLISASED 188
NG +A G + + WD R +K + +H ++QV F P E L++AS D
Sbjct: 456 NGYHLATGGEDNTCRIWDLRKKKSFYTIP-AHSNLISQVKFEPHEGYFLVTASYD 509
>Glyma17g02820.1
Length = 331
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 87/182 (47%), Gaps = 25/182 (13%)
Query: 74 FKGHSSTINQILFSGPSNPHVLNSCSSDGTIRAWDTRTFQQVSTIDAGPSQEVFSISLGG 133
++GH ++ + FS S+ L S S D T+R WD T + T+ G + VF ++
Sbjct: 79 YEGHEQGVSDLAFS--SDSRFLVSASDDKTLRLWDVPTGSLIKTLH-GHTNYVFCVNF-N 134
Query: 134 PNGNLIAAGC-KSKILFWDWRNRKQIACLEDSHVEDVTQVHFVPDERGKLI-SASEDGLI 191
P N+I +G + WD ++ K + L +H + VT V F D G LI S+S DGL
Sbjct: 135 PQSNIIVSGSFDETVRVWDVKSGKCLKVLP-AHSDPVTAVDFNRD--GSLIVSSSYDGLC 191
Query: 192 CTFD-TTGD-----INDDDHLESVINVGTSIAKVGLFGESYQKLWCLTHIETLGVWDWKD 245
+D +TG I+DD+ S + + AK L G T TL +W++
Sbjct: 192 RIWDASTGHCMKTLIDDDNPPVSFVKFSPN-AKFILVG---------TLDNTLRLWNYST 241
Query: 246 GR 247
G+
Sbjct: 242 GK 243