Miyakogusa Predicted Gene

Lj1g3v4431070.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v4431070.1 Non Chatacterized Hit- tr|B9FNH5|B9FNH5_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,33.03,0.0000007, ,CUFF.32336.1
         (209 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g30960.1                                                       323   7e-89
Glyma03g30960.2                                                       254   5e-68
Glyma19g33780.1                                                       199   2e-51

>Glyma03g30960.1 
          Length = 259

 Score =  323 bits (828), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 157/209 (75%), Positives = 176/209 (84%), Gaps = 8/209 (3%)

Query: 1   MHSEIKELEIALGSEVKASFRRKHVSKMREIKVGIKRLDKLMKSLLNLQTAIKVMINENP 60
           MHSE K+LE+ LG+EVK SFRRKHVSKMR+IKVGIKRLDKLM SLLN+QTA K+MI+E P
Sbjct: 59  MHSEYKQLEMELGTEVKPSFRRKHVSKMRDIKVGIKRLDKLMNSLLNVQTAFKIMISEIP 118

Query: 61  NIEEVILALGASPVRPQHIFVLNFPPGLAVSKVEDDFARSKVAEGLSRKAIQSFISKGAG 120
            I+ V+LALGASP+RP+HI+VLNF     VSKV+DDFARSK A+ LSRKAI++ ISK AG
Sbjct: 119 TIDGVVLALGASPLRPKHIYVLNFSHESGVSKVDDDFARSKAADTLSRKAIRTLISKDAG 178

Query: 121 SVIYPGPIKLFVLIKAPCSFNQPLHFLPKRDFRYNRKVVPLKLLIKCRNQDQEVANQDQE 180
           SV YPGPIKLFVLIKAP SFNQP+HFLPKRDFRYNRKVVPL LL KCRNQDQEV      
Sbjct: 179 SVTYPGPIKLFVLIKAPSSFNQPMHFLPKRDFRYNRKVVPLGLLFKCRNQDQEV------ 232

Query: 181 VAASTSEDLIWFQCRHVIKGLAMNITQEE 209
              +T+EDLIWFQCRHVIKGLAMN   EE
Sbjct: 233 --TATTEDLIWFQCRHVIKGLAMNPMPEE 259


>Glyma03g30960.2 
          Length = 241

 Score =  254 bits (648), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 121/158 (76%), Positives = 139/158 (87%)

Query: 1   MHSEIKELEIALGSEVKASFRRKHVSKMREIKVGIKRLDKLMKSLLNLQTAIKVMINENP 60
           MHSE K+LE+ LG+EVK SFRRKHVSKMR+IKVGIKRLDKLM SLLN+QTA K+MI+E P
Sbjct: 59  MHSEYKQLEMELGTEVKPSFRRKHVSKMRDIKVGIKRLDKLMNSLLNVQTAFKIMISEIP 118

Query: 61  NIEEVILALGASPVRPQHIFVLNFPPGLAVSKVEDDFARSKVAEGLSRKAIQSFISKGAG 120
            I+ V+LALGASP+RP+HI+VLNF     VSKV+DDFARSK A+ LSRKAI++ ISK AG
Sbjct: 119 TIDGVVLALGASPLRPKHIYVLNFSHESGVSKVDDDFARSKAADTLSRKAIRTLISKDAG 178

Query: 121 SVIYPGPIKLFVLIKAPCSFNQPLHFLPKRDFRYNRKV 158
           SV YPGPIKLFVLIKAP SFNQP+HFLPKRDFRYNRK+
Sbjct: 179 SVTYPGPIKLFVLIKAPSSFNQPMHFLPKRDFRYNRKL 216


>Glyma19g33780.1 
          Length = 221

 Score =  199 bits (505), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 105/172 (61%), Positives = 121/172 (70%), Gaps = 28/172 (16%)

Query: 1   MHSEIKELEIALGSEVKASFRRKHVSKMREIKVGIKRLDKLMKSLLNLQTAIKVMINENP 60
           MHSE K+LE+ LG+EVK SFRRKHVSKMR+IKVG KRLDKLM SLLN+QTA K MI+E P
Sbjct: 51  MHSEYKQLEMELGTEVKPSFRRKHVSKMRDIKVGTKRLDKLMNSLLNMQTAFKTMISEVP 110

Query: 61  NIEEVILALGASPVRPQHIFVLNFPPGLAVSKVEDDFARSKVAEGLSRKAIQSFISKGAG 120
            ++ V+LALGASP+RPQHI+VLNF               S     + R +I++ ISK AG
Sbjct: 111 IVDGVVLALGASPLRPQHIYVLNF--------------SSARLMMILRGSIRTLISKDAG 156

Query: 121 SVIYPG--------------PIKLFVLIKAPCSFNQPLHFLPKRDFRYNRKV 158
           SV YPG              PIKLFVLIKAP SFNQP+HF PKRDFRYNRKV
Sbjct: 157 SVTYPGTYSLFFFFYLFKQSPIKLFVLIKAPSSFNQPMHFPPKRDFRYNRKV 208