Miyakogusa Predicted Gene
- Lj1g3v3981460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3981460.1 Non Chatacterized Hit- tr|K3YRK4|K3YRK4_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016898,25.33,7e-18,GD2B,NULL; CTL TRANSPORTER,Choline
transporter-like; Choline_transpo,Choline transporter-like;
seg,N,CUFF.31738.1
(464 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma16g04000.1 523 e-148
Glyma19g29550.1 520 e-147
Glyma11g16250.1 228 1e-59
Glyma10g42290.1 87 4e-17
Glyma01g21270.3 86 1e-16
Glyma20g24760.1 83 7e-16
Glyma01g21270.1 64 4e-10
>Glyma16g04000.1
Length = 336
Score = 523 bits (1347), Expect = e-148, Method: Compositional matrix adjust.
Identities = 256/331 (77%), Positives = 283/331 (85%), Gaps = 1/331 (0%)
Query: 134 MGILFVCIGSPVSLSAGVIALVFAVIQSLYGCWVSPRFEYATRILSVSIASPPEKTQGXX 193
MGI+FVCIG+ VSL+ GVIALV A++QSLY CWV+PRFEYAT+ILSVS+A PP +TQG
Sbjct: 1 MGIMFVCIGTAVSLAVGVIALVCALVQSLYFCWVNPRFEYATKILSVSVAFPPNRTQGLT 60
Query: 194 XXXXXXXXXXXXXXXAGIGGARALENRTKLAPLFILVILLSLGWSMQFLKNAMQVTISRV 253
AGIGGARA+ENRT+LA FI +ILLSLGW+MQFLKNAM VTISRV
Sbjct: 61 LYSILIGILYCCFLLAGIGGARAIENRTQLAEFFIFLILLSLGWTMQFLKNAMYVTISRV 120
Query: 254 KYVHFAGGAAEIDTRVAICDTIKYLTGSVCIGSILVPIFGLFRGFARSMSLIGGHTDEFM 313
KY+HFAGG ++DTRVA+CDTIK+LTGSV +GSILVP+ LFRGFAR+ SL+GG TDEFM
Sbjct: 121 KYMHFAGGV-DMDTRVAVCDTIKHLTGSVSMGSILVPVIVLFRGFARTTSLVGGDTDEFM 179
Query: 314 FSCVSCYMGIASVLVNFGNRWGFVHVGVYNKGFVQASSDVWEMFNRVGLEQLIDLDLTGV 373
FSCVSCYMG+AS+LV GNRWGFVHVGVYNKGFVQAS D WEMF RVGLEQLIDLDLTG
Sbjct: 180 FSCVSCYMGVASLLVVRGNRWGFVHVGVYNKGFVQASCDTWEMFIRVGLEQLIDLDLTGA 239
Query: 374 FCFFSGVAAGAICSLVSGIWSLAMHKSYAIEVSIYGFLIGYFMCRLAIAWPQACVSAYYV 433
FCF SGV GAICSLVSGIWS+ MHKSYA EVSIY FLIGYFMCRLAIAW QACVSAYYV
Sbjct: 240 FCFLSGVGTGAICSLVSGIWSIVMHKSYATEVSIYAFLIGYFMCRLAIAWVQACVSAYYV 299
Query: 434 AYAENPQSTQFDSTIPVRLEQLHRSQALQRF 464
AYAENPQSTQFDSTIP+RLEQL+RSQALQ F
Sbjct: 300 AYAENPQSTQFDSTIPIRLEQLNRSQALQIF 330
>Glyma19g29550.1
Length = 336
Score = 520 bits (1340), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/331 (77%), Positives = 281/331 (84%), Gaps = 1/331 (0%)
Query: 134 MGILFVCIGSPVSLSAGVIALVFAVIQSLYGCWVSPRFEYATRILSVSIASPPEKTQGXX 193
MGI+FVCIG+ VSL+ GVIALV A++QSLY CWV+PRFEYATRILSVSIA PP +TQG
Sbjct: 1 MGIMFVCIGTAVSLAVGVIALVCALVQSLYFCWVNPRFEYATRILSVSIAFPPNRTQGLT 60
Query: 194 XXXXXXXXXXXXXXXAGIGGARALENRTKLAPLFILVILLSLGWSMQFLKNAMQVTISRV 253
AGIGG RA+ENRTKLA FI +ILLSLGW+MQFLKNAM VTISRV
Sbjct: 61 LYSILIGTLYCCFLVAGIGGGRAIENRTKLAAFFIFLILLSLGWTMQFLKNAMYVTISRV 120
Query: 254 KYVHFAGGAAEIDTRVAICDTIKYLTGSVCIGSILVPIFGLFRGFARSMSLIGGHTDEFM 313
KY++FAGG ++DTRVA CDTIK+LTGSV +GSILVP+ LFRGFAR+ SL+GG TDEFM
Sbjct: 121 KYMNFAGGV-DMDTRVAFCDTIKHLTGSVSMGSILVPVIVLFRGFARTTSLVGGDTDEFM 179
Query: 314 FSCVSCYMGIASVLVNFGNRWGFVHVGVYNKGFVQASSDVWEMFNRVGLEQLIDLDLTGV 373
FSCVSCYMG+AS LV GNRWGFVHVGVYNKGFVQAS+D WEMF RVGLEQLIDLDLTG
Sbjct: 180 FSCVSCYMGVASFLVVRGNRWGFVHVGVYNKGFVQASTDTWEMFIRVGLEQLIDLDLTGA 239
Query: 374 FCFFSGVAAGAICSLVSGIWSLAMHKSYAIEVSIYGFLIGYFMCRLAIAWPQACVSAYYV 433
FCF SGV GAICSLVSGIWS+ MHKSYA EVSIY FLIGYF+CRLAIAW QACVSAYYV
Sbjct: 240 FCFLSGVGTGAICSLVSGIWSIVMHKSYATEVSIYAFLIGYFICRLAIAWVQACVSAYYV 299
Query: 434 AYAENPQSTQFDSTIPVRLEQLHRSQALQRF 464
AYAENPQSTQFDSTIPVRLEQL+RSQALQ F
Sbjct: 300 AYAENPQSTQFDSTIPVRLEQLNRSQALQIF 330
>Glyma11g16250.1
Length = 550
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/384 (31%), Positives = 200/384 (52%), Gaps = 14/384 (3%)
Query: 75 GLVSDSHTHHFHPRK----WYPPLLASTVCAGILGFTWQWIISCHPTKAFKVAFWLSPLL 130
GL+ +S ++ + + P + A++ + IL F WQ I PT W + ++
Sbjct: 151 GLIQESESNKRKEKNVLKYFLPQVEAASFMSIILAFIWQGAIRKWPTFMLHFILWFTFVV 210
Query: 131 TCAMGILFVCIGSPVSLSAGVIALVFAVIQSLYGCWVSPRFEYATRILSVS---IASPPE 187
+ A GIL +C P + GV + FA+ LY CWVS R ++ ++LS+S ++ P+
Sbjct: 211 SLAAGILLICFQKPATDGVGVCFIAFAIGNGLYACWVSHRIKFCCKVLSLSLQPVSKFPD 270
Query: 188 KTQGXXXXXXXXXXXXXXXXXAGIGGARALENRTKLAPLFILVILLSLGWSMQFLKNAMQ 247
++ A IG PL I+ ++LSL W+ + ++N +
Sbjct: 271 LSKPTYYVLGAGFLWISLWILAVIGALNFY-----FPPLVIIALVLSLAWTTEVMRNVVN 325
Query: 248 VTISRVKYVHFAGGAAEIDTRVAICDTIKYLTGSVCIGSILVPIFGLFRGFARSMSLIGG 307
+T+SRV +++ G + T+ + GS C+GS+ VP R AR ++L+ G
Sbjct: 326 ITVSRVIALYYLRGM-QSSTQFCFLRALTRNLGSACLGSLFVPAIEALRIVARGLNLLEG 384
Query: 308 HTDEFMFSCVSCYMGIASVLVNFGNRWGFVHVGVYNKGFVQASSDVWEMFNRVGLEQLID 367
DEFMF C C + + + GN W +V + Y KGFV+AS D W +F + + ++D
Sbjct: 385 E-DEFMFCCAHCCLRVMESIFRNGNGWAYVQIAAYGKGFVKASQDTWALFEKEDMVSIVD 443
Query: 368 LDLTGVFCFFSGVAAGAICSLVSGIWSLAMHKSYAIEVSIYGFLIGYFMCRLAIAWPQAC 427
D+T CF +GV +G++C +V W+ +H+++ +S+ F IGY + R+A+A P AC
Sbjct: 444 ADITSSICFLTGVCSGSLCVIVVAAWTYKVHQTFTATLSLLTFFIGYLLTRIAMAVPHAC 503
Query: 428 VSAYYVAYAENPQSTQFDSTIPVR 451
VS YYV YAE P++ FD TI R
Sbjct: 504 VSCYYVCYAETPENRLFDKTIKDR 527
>Glyma10g42290.1
Length = 495
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Query: 227 FILVILLSLGWSMQFLKNAMQVTISRVKY-VHFAGG--AAEIDTRVAICDTIKY-LT--- 279
++V+ +SL W+ L N + V +S + + V F GG AA I ++ +++Y LT
Sbjct: 230 LLVVLSVSLFWTGAVLCNTVHVVVSGMVFLVLFHGGRDAASIPAN-SLMKSLQYALTTSF 288
Query: 280 GSVCIGSILVPIFGLFRGFARSM-SLIGGHTDEFMFSCVSCYMGIASVLVNFGNRWGFVH 338
GS+C GS+ R R S IG +E + V + LV F N++ +V
Sbjct: 289 GSICYGSLFTAAIRTLRWEIRGFRSKIG--NNECLLCLVDFLFHLVETLVRFFNKYAYVQ 346
Query: 339 VGVYNKGFVQASSDVWEMFNRVGLEQLIDLDLTGVFCFFSGVAAGAICSLVSGIWSLAMH 398
+ VY K F ++ D WE+F G+E L+ D +G V G I SG+W+
Sbjct: 347 IAVYGKSFNHSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLITGTCSGVWAWVKW 406
Query: 399 KSYAIEVSIYGFLIGYFMCRLAIAWPQACVSAYYVAYAENPQSTQ-FDSTIPVRL-EQLH 456
K I + L+G + LA+ ++ V++ Y+ YAE+P Q +D+ ++ E LH
Sbjct: 407 KDRVIMIGYTTMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLH 466
Query: 457 RSQALQ 462
Q LQ
Sbjct: 467 --QRLQ 470
>Glyma01g21270.3
Length = 317
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 114/251 (45%), Gaps = 16/251 (6%)
Query: 227 FILVILLSLGWSMQFLKNAMQVTIS-RVKYVHFAGGAAEIDTRV-AICDTIKY-LT---G 280
++V+ +SL W+ L N + V +S V V GG + + ++Y LT G
Sbjct: 55 LLVVLSISLFWTGAVLCNTVHVIVSGTVVLVSIHGGREAVSIPANSFMKCLQYALTTSFG 114
Query: 281 SVCIGSILVPIFGLFRGFARSM-SLIGGHTDEFMFSCVSCYMGIASVLVNFGNRWGFVHV 339
S+C GS+ R R + S IG +E + CV + LV F N++ +V +
Sbjct: 115 SICYGSLFTAAIRTLRWEIRGIRSRIG--NNECLLCCVDFVFHLVETLVRFFNKYAYVQI 172
Query: 340 GVYNKGFVQASSDVWEMFNRVGLEQLIDLDLTGVFCFFSGVAAGAICSLVSGIWSLAMHK 399
VY K F +++ D WE+F G+E L+ D +G + G I SG+W+
Sbjct: 173 AVYGKSFNRSARDAWELFQSTGVETLVAYDCSGAVLLMGTIFGGLITGTCSGVWAWIKWN 232
Query: 400 SYAIEVSIYGFLIGYFMCRLAIAWPQACVSAYYVAYAENP-----QSTQFDSTIPVRLEQ 454
A + L+G + +A+ ++ V++ Y+ YAE+P T+F + + L Q
Sbjct: 233 DRAFMIGSTSMLMGMILVGVAMVVVESAVTSIYICYAEDPLLIQRWDTEFFNQMSETLHQ 292
Query: 455 L--HRSQALQR 463
HRS R
Sbjct: 293 RLQHRSSRGAR 303
>Glyma20g24760.1
Length = 492
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 116/245 (47%), Gaps = 13/245 (5%)
Query: 227 FILVILLSLGWSMQFLKNAMQVTISRVKY-VHFAGGAAEIDTRV-AICDTIKY-LT---G 280
++V+ +SL W+ L N + V +S + + V F GG ++ +++Y LT G
Sbjct: 227 LLVVLSMSLFWTGAVLCNTVHVVVSGMVFLVLFHGGRDGTSIPANSLMKSLQYALTTSFG 286
Query: 281 SVCIGSILVPIFGLFRGFARSM-SLIGGHTDEFMFSCVSCYMGIASVLVNFGNRWGFVHV 339
S+C GS+ R R S IG +E + V + LV F N++ +V +
Sbjct: 287 SICYGSLFTAAIRTLRWEIRGFRSKIG--NNECLLCLVDFLFHLVETLVRFFNKYAYVQI 344
Query: 340 GVYNKGFVQASSDVWEMFNRVGLEQLIDLDLTGVFCFFSGVAAGAICSLVSGIWSLAMHK 399
VY K F +++ D WE+F G+E L+ D +G V G I SG+W+
Sbjct: 345 AVYGKSFNRSARDAWELFQSTGVEALVAYDCSGAVLLMGTVFGGLITGTCSGVWAWVKWS 404
Query: 400 SYAIEVSIYGFLIGYFMCRLAIAWPQACVSAYYVAYAENPQSTQ-FDSTIPVRL-EQLHR 457
I + L+G + LA+ ++ V++ Y+ YAE+P Q +D+ ++ E LH
Sbjct: 405 DRVIMIGSTTMLMGMVLVGLAMVVVESAVTSIYICYAEDPLLIQRWDAEFFNQMSETLH- 463
Query: 458 SQALQ 462
Q LQ
Sbjct: 464 -QRLQ 467
>Glyma01g21270.1
Length = 1754
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%)
Query: 338 HVGVYNKGFVQASSDVWEMFNRVGLEQLIDLDLTGVFCFFSGVAAGAICSLVSGIWSLAM 397
H+ VY K F +++ D WE+F G+E L+ D +G + G I SG+W+
Sbjct: 1496 HIAVYGKSFNRSARDAWELFQSTGVETLVAYDCSGAVLLMGTIFGGLITGTCSGVWAWIK 1555
Query: 398 HKSYAIEVSIYGFLIGYFMCRLAIAWPQACVSAYYVAYAENP 439
A + L+G + +A+ ++ V++ Y+ YAE+P
Sbjct: 1556 WNDRAFMIGSTSMLMGMILVGVAMVVVESAVTSIYICYAEDP 1597