Miyakogusa Predicted Gene
- Lj1g3v3343860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3343860.1 tr|G7J729|G7J729_MEDTR Telomeric repeat-binding
factor OS=Medicago truncatula GN=MTR_3g116690 PE=4
S,28.14,1e-18,Myb_DNA-binding,SANT/Myb domain; SANT SWI3, ADA2, N-CoR
and TFIIIB'' DNA-bin,SANT/Myb domain; HTH_M,CUFF.30497.1
(340 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma06g24730.1 120 2e-27
Glyma08g05240.1 104 2e-22
Glyma18g05900.1 84 2e-16
Glyma04g18440.1 78 2e-14
Glyma11g30730.1 76 6e-14
Glyma11g30740.1 67 4e-11
Glyma04g18430.1 56 6e-08
>Glyma06g24730.1
Length = 475
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 67/83 (80%)
Query: 252 GETSNRPQLPSPKRKRVSPLKKYEPRNVIKRRTTRKWSQLEEETLEKAVNKFGIGNWKLM 311
+ + R LPSPK ++VSPL KY+P N+ KRR +KWSQLEEETL AV+KFG GNWKL+
Sbjct: 392 SDHATRFNLPSPKGRKVSPLNKYKPANITKRRKVKKWSQLEEETLRTAVDKFGRGNWKLI 451
Query: 312 LNAHKDVFERRTDGDLKDKWRNM 334
L++HKD+FE RT+ DLKDKWRNM
Sbjct: 452 LDSHKDIFEERTEVDLKDKWRNM 474
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 92/161 (57%), Gaps = 12/161 (7%)
Query: 82 SASFTAAYCAVAVECTLKYIKLE-GSIPRYFDSVKTIWWKRVMNMKPSPGGEKRSLLFSD 140
S++ +AAYCAVAVECTLK++ LE + P Y +V IW RV M S G SLL S
Sbjct: 73 SSAMSAAYCAVAVECTLKHLLLELHNNPAYLGAVNRIWRGRVRLMSGSGEG---SLLLSP 129
Query: 141 ELDRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKVFFAELWEGVDPSFLELA----V 196
EL+RWR DIEASL D VR+RLA+ +TR A+ +L+ + E W + PSFLE A +
Sbjct: 130 ELERWRTDIEASLLDSSVRERLASI-DTRRDAVFKLRDYLKEAWTDLGPSFLERAALAHI 188
Query: 197 ENAATDAAEEQQRETQEGNLLLDDICITNVVEEMDPSTTCQ 237
N A A + + E + + C EE+ PST +
Sbjct: 189 NNNALAANHSEDSQQPEREI---EKCTAAPAEEVHPSTDVE 226
>Glyma08g05240.1
Length = 256
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 67/89 (75%), Gaps = 3/89 (3%)
Query: 251 EGETSN---RPQLPSPKRKRVSPLKKYEPRNVIKRRTTRKWSQLEEETLEKAVNKFGIGN 307
EG TS+ R LPSPK +VSPL KY+P + + R T++WSQLEEET + AV+KFG G
Sbjct: 164 EGGTSDHAIRCHLPSPKGTKVSPLTKYKPTKITRSRKTKRWSQLEEETRKTAVDKFGRGK 223
Query: 308 WKLMLNAHKDVFERRTDGDLKDKWRNMRR 336
WKLML+++KD+F+ RT+ DL DKWR+M R
Sbjct: 224 WKLMLDSNKDIFKERTEVDLNDKWRSMTR 252
>Glyma18g05900.1
Length = 468
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 96/197 (48%), Gaps = 20/197 (10%)
Query: 1 MDGDTGRWALEFFIGKRIINNTLIQEIIRTIKVPPNPNSYFIKSXXXXXXXXXXXXXXXX 60
M+ D RW +EF + + + ++LIQ+ + + P +P +K
Sbjct: 1 MNSDISRWVMEFLL-RSSVPDSLIQKTLTAL--PLSPAEPRLKKNLLLRTLQTLLRRATL 57
Query: 61 XXXXXXXXXXXXVLRSEGSPVSASFTAAYCAVAVECTLKYIKLEGSI--PRYFDSVKTIW 118
+ + +PVS + AYCAVAVECT+KY+ + Y +V+ IW
Sbjct: 58 SETALD-------ILEDLAPVSDAQRRAYCAVAVECTVKYLAACPDVIDGEYAGAVRRIW 110
Query: 119 WKRVMNMKPSPGGEKRSLLFSDELDRWRIDIEASLNDP--CVRDRLAATENTRSVAINRL 176
RV ++ +RS L S EL RWR +IE +L + R+RLA N+R A+N +
Sbjct: 111 RGRVAALQA-----RRSGLVSGELVRWRDEIENALGEDSRAARERLAGL-NSRRDAMNEV 164
Query: 177 KVFFAELWEGVDPSFLE 193
+V+ E WE + PSFLE
Sbjct: 165 RVYLKEAWEMMGPSFLE 181
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 37/55 (67%)
Query: 282 RRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRR 336
RR RKWS LEEETL V FG GNW + + + ++FE R+ DLKDKWRNM R
Sbjct: 414 RRRKRKWSSLEEETLRAGVKMFGEGNWATIRSFYSNIFENRSGVDLKDKWRNMIR 468
>Glyma04g18440.1
Length = 310
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 3 GDTGRWALEFFIGKR--IINNTLIQEIIRTIKVPPNPNSYFIKSXXXXXXXXXXXXXXXX 60
GD G W LEF + R ++++ L+++++R + + +
Sbjct: 4 GDVGHWVLEFLLRARYPVVSSNLLKKVLRIVPLSDFDSRLQKTLLLRTLQDHLFAVSVPE 63
Query: 61 XXXXXXXXXXXXVLRSEGSPVSASFTAAYCA-VAVECTLKYIKLE-GSIPRYFDSVKTIW 118
R +G+ ++A+ +A +AV+CTLK++ +E + P Y +V IW
Sbjct: 64 SVLETLELLEELHRRDDGALITAAAMSAAYCAIAVDCTLKHLLVELHNNPAYLGAVNRIW 123
Query: 119 WKRVMNMKPSPGGEKRSLLFSDELDRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKV 178
RV +M S G S EL+RWR DIE SL D VR+RLA+ + TR A+ +L+
Sbjct: 124 RGRVRHMSGSREGSLLL---SLELERWRTDIETSLLDSLVRERLASID-TRRDAVVKLRD 179
Query: 179 FFAELWEGVDPSFLELA 195
+ E W + PSFLELA
Sbjct: 180 YLMEAWTDLGPSFLELA 196
>Glyma11g30730.1
Length = 221
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 79 SPVSASFTAAYCAVAVECTLKYIKL--EGSIPRYFDSVKTIWWKRVMNMKPSPGGEKRSL 136
+PVS + AYCAVAVECT+KY+ E Y +V+ IW RV +K + S
Sbjct: 72 APVSDAHRRAYCAVAVECTVKYLAACPEDIDGEYAGAVRRIWRGRVSALKA-----RWSR 126
Query: 137 LFSDELDRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKVFFAELWEGVDPSFLE 193
L S EL RWR +E + D R RL N+R A+ ++VF E W + PSFLE
Sbjct: 127 LVSGELARWRDVVEDAFGDSRARQRLVGL-NSRRDAMKEVRVFLKEAWGAMGPSFLE 182
>Glyma11g30740.1
Length = 220
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 37/55 (67%)
Query: 282 RRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRR 336
RR RKWS LEEETL V FG GNW + + + +VFE R+ DLKDKWRNM R
Sbjct: 166 RRRKRKWSSLEEETLRAGVKMFGEGNWASIRSFYSNVFENRSGVDLKDKWRNMIR 220
>Glyma04g18430.1
Length = 32
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 304 GIGNWKLMLNAHKDVFERRTDGDLKDKWRNMR 335
G GNWKL+L++HKD+FE RT+ DLKDKWRNMR
Sbjct: 1 GRGNWKLILDSHKDIFEERTEVDLKDKWRNMR 32