Miyakogusa Predicted Gene
- Lj1g3v3182310.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3182310.1 Non Chatacterized Hit- tr|I1Q1U6|I1Q1U6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,48.28,5e-19,MYB_LIKE,Myb-like domain; HTH_MYB,Myb domain; no
description,Homeodomain-like; SANT SWI3, ADA2,
N-C,NODE_71482_length_1086_cov_15.684162.path1.1
(252 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g19060.1 426 e-120
Glyma17g34580.1 208 5e-54
Glyma06g08660.1 56 4e-08
Glyma04g08550.1 53 4e-07
Glyma01g42650.1 53 4e-07
>Glyma13g19060.1
Length = 634
Score = 426 bits (1096), Expect = e-120, Method: Compositional matrix adjust.
Identities = 192/251 (76%), Positives = 219/251 (87%)
Query: 1 MILHCKSHPEVRDCWKEIGAVLPKRPHISVYYRAHILFERDETRKWTPDEFEVLRKLQNQ 60
M+LHCKSHPE+RDCWKEIGA LP+RP++SVY RAHILFER E RKWTP+E+E LRK++ Q
Sbjct: 383 MVLHCKSHPEIRDCWKEIGAALPQRPYVSVYTRAHILFERGEDRKWTPEEYEFLRKVKEQ 442
Query: 61 HGSDWKKIAGVLGKHPVHVKDAWRRIRQTDTNKGRWTQDEYQQLFDLVNKDLRARAAEEC 120
HGSDWK +A LGKH HVKDAWRRI+ T+TN+GRWTQ+EYQ LFDLVN DLR RA+++
Sbjct: 443 HGSDWKSVAEALGKHRFHVKDAWRRIKLTNTNQGRWTQEEYQNLFDLVNLDLRVRASQDY 502
Query: 121 RKSKHGMLRDNVSWEAISNKFGARNSARCCLKWYKQLTSPMVADGVWSDTDDYRLLNALY 180
RKSKHGMLRDN+ WEAI +K R+S CC KWY +LTSPMVA+GVWSDTDDYRL+NAL+
Sbjct: 503 RKSKHGMLRDNIGWEAIGDKLTTRSSVLCCKKWYDKLTSPMVANGVWSDTDDYRLVNALF 562
Query: 181 TLDAYSMEEVDWDNLLEHRSGDMSRKRWNQMVQYIGQHGTKSFAEQVEILAKRFCPDLLE 240
TLDA MEEVDWDNLLEHR GD+ RKRWNQMVQYIG+HG KSFAEQVEILAKRFCPDLLE
Sbjct: 563 TLDACCMEEVDWDNLLEHRPGDVCRKRWNQMVQYIGEHGGKSFAEQVEILAKRFCPDLLE 622
Query: 241 AREAFDSKPVV 251
REAFD KPV+
Sbjct: 623 VREAFDEKPVI 633
>Glyma17g34580.1
Length = 351
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/142 (69%), Positives = 116/142 (81%), Gaps = 6/142 (4%)
Query: 116 AAEECRKSKHGMLRDNVSWEAISNKFGARNSARCCLKWYKQLTSPMVADG------VWSD 169
A+++ RKSKHGMLRDN WE I +K R+SA CC KWY +LTSPMVA+G ++
Sbjct: 209 ASQDLRKSKHGMLRDNSGWETIGDKLTTRSSAVCCTKWYYKLTSPMVANGPICETCIFLT 268
Query: 170 TDDYRLLNALYTLDAYSMEEVDWDNLLEHRSGDMSRKRWNQMVQYIGQHGTKSFAEQVEI 229
T+DYRL+NAL+TL+A MEEVDWDNLLEHR GD+ RK WNQMVQYIG+HG KSFAEQVEI
Sbjct: 269 TNDYRLVNALFTLNACCMEEVDWDNLLEHRPGDVCRKWWNQMVQYIGEHGGKSFAEQVEI 328
Query: 230 LAKRFCPDLLEAREAFDSKPVV 251
LAKRFCPDLLE REAFD+KPV+
Sbjct: 329 LAKRFCPDLLEVREAFDAKPVI 350
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 43/50 (86%)
Query: 1 MILHCKSHPEVRDCWKEIGAVLPKRPHISVYYRAHILFERDETRKWTPDE 50
M+LHC+SHPE+RD WKEIG LP+RP++SVY RAHIL ER + R+WTP++
Sbjct: 152 MVLHCRSHPEIRDYWKEIGTALPQRPYVSVYTRAHILLERGKNREWTPED 201
>Glyma06g08660.1
Length = 980
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 27 HISVYYRAHILFERDETRKWTPDEFEVLRK-LQNQHGSDWKKIAGVL-GKHPVHVKDAWR 84
H+++ R R +WTP+E E+LRK +Q G +WKKIA + V W+
Sbjct: 24 HLTIDMRTTGPTRRSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQ 83
Query: 85 RIRQTDTNKGRWTQDEYQQLFDLVNKDLRARAAEECRKSKHGMLRDNVSWEAISNKFGAR 144
++ + KG W+++E + + DLVN ++G + W I+ R
Sbjct: 84 KVLNPELVKGPWSKEEDEIIIDLVN--------------RYGPKK----WSTIAQHLPGR 125
Query: 145 NSARCCLKWYKQLTSPMVADGVWSDTDDYRLLNALYTLDAYSMEEVDWDNLLEHRSGDMS 204
+C +W+ L +P + W+ ++ L+ A Y + LL R+ +
Sbjct: 126 IGKQCRERWHNHL-NPTINKEAWTQEEELALIRAHQI---YGNRWAELAKLLPGRTDNSI 181
Query: 205 RKRWNQMVQ 213
+ WN V+
Sbjct: 182 KNHWNSSVK 190
>Glyma04g08550.1
Length = 998
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 40 RDETRKWTPDEFEVLRK-LQNQHGSDWKKIAGVL-GKHPVHVKDAWRRIRQTDTNKGRWT 97
R +WTP+E E+LRK +Q G +WKKIA + V W+++ + KG W+
Sbjct: 34 RSTKGQWTPEEDEILRKAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWS 93
Query: 98 QDEYQQLFDLVNKDLRARAAEECRKSKHGMLRDNVSWEAISNKFGARNSARCCLKWYKQL 157
++E + + DLVN ++G + W I+ R +C +W+ L
Sbjct: 94 KEEDEIIIDLVN--------------RYGPKK----WSTIAQHLPGRIGKQCRERWHNHL 135
Query: 158 TSPMVADGVWSDTDDYRLLNALYTLDAYSMEEVDWDNLLEHRSGDMSRKRWNQMVQ 213
+P + W+ ++ L+ A Y + LL R+ + + WN V+
Sbjct: 136 -NPTINKEAWTQEEELALIRAHQI---YGNRWAELAKLLPGRTDNSIKNHWNSSVK 187
>Glyma01g42650.1
Length = 434
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 24/168 (14%)
Query: 44 RKWTPDEFEVL-RKLQNQHGSDWKKIAGVL-GKHPVHVKDAWRRIRQTDTNKGRWTQDEY 101
R+WT +E ++L K++ +G +WKKIA L G+ V W+++ D KG WT+ E
Sbjct: 52 RRWTEEEDKLLSEKVKKHNGRNWKKIAAYLPGRTDVQCLHRWQKVLNPDLVKGSWTKKED 111
Query: 102 QQLFDLVNKDLRARAAEECRKSKHGMLRDNVSWEAISNKFGARNSARCCLKWYKQLTSPM 161
+L +LV K+G+ R W I+ R +C +W+ L P
Sbjct: 112 DRLIELVR--------------KYGIKR----WFFIAKYLPGRIGKQCRERWHNHL-DPT 152
Query: 162 VADGVWSDTDDYRLLNALYTLDAYSMEEVDWDNLLEHRSGDMSRKRWN 209
V W++ ++ L Y Y + + +L R+ + + WN
Sbjct: 153 VKKDAWTEEEELIL---AYYYQIYGSKWAEIARILPGRTDNAIKNHWN 197