Miyakogusa Predicted Gene

Lj1g3v2448110.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v2448110.2 tr|F2EJ57|F2EJ57_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,50.49,2e-16,coiled-coil,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL; seg,NULL; DUF827,Protein of unkno,CUFF.29035.2
         (208 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g04620.1                                                       201   5e-52
Glyma01g32380.1                                                       192   2e-49
Glyma11g35930.1                                                       120   1e-27
Glyma18g44410.1                                                       110   1e-24
Glyma18g02470.1                                                       107   8e-24
Glyma14g05820.1                                                       102   2e-22
Glyma09g41370.1                                                        90   2e-18
Glyma06g04270.1                                                        62   3e-10
Glyma04g04100.1                                                        62   4e-10
Glyma14g09080.1                                                        59   3e-09
Glyma03g04110.1                                                        54   1e-07
Glyma03g04550.1                                                        53   2e-07

>Glyma03g04620.1 
          Length = 560

 Score =  201 bits (511), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 113/201 (56%), Positives = 133/201 (66%), Gaps = 8/201 (3%)

Query: 10  VVKTTTNRADPGKQSFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVIT--CVGSNSKH 67
           V  T  NR+DPG   FR EIDTSAPFESV+EAVT FGGVGYWKP  N ++     +   H
Sbjct: 4   VPDTAANRSDPG---FRAEIDTSAPFESVREAVTRFGGVGYWKPILNGLSNKHFAAPEPH 60

Query: 68  RIEELDGEKLEEQAAAMEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXX 127
             EELD EKLEEQAA +EK+LILKERETLDVLKELESTKRLVE+                
Sbjct: 61  HAEELDPEKLEEQAAVLEKDLILKERETLDVLKELESTKRLVENLKSKVQKEESEANLNF 120

Query: 128 XMNVSDQRSIAXXXXXXXNQESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLT 187
             +V +  S          +    +V+Q+SKEG +P     SS+PGLILMEL QAK NL 
Sbjct: 121 QTSVCENISSVKEDEREDKENRVSNVVQNSKEGCVP---YPSSSPGLILMELKQAKFNLN 177

Query: 188 KTTNDLADVRAAVESLNKKLE 208
           +TT+D+ADVRA+VESLNKKLE
Sbjct: 178 RTTSDIADVRASVESLNKKLE 198


>Glyma01g32380.1 
          Length = 559

 Score =  192 bits (488), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/201 (54%), Positives = 128/201 (63%), Gaps = 8/201 (3%)

Query: 10  VVKTTTNRADPGKQSFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVIT--CVGSNSKH 67
           V  T  NR++PG    R EIDTSAPFESV+EAVT FGGVGYWKP  N ++     +   H
Sbjct: 4   VPDTAANRSEPG---LRAEIDTSAPFESVREAVTRFGGVGYWKPILNGLSNKHFAATEPH 60

Query: 68  RIEELDGEKLEEQAAAMEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXX 127
             EELD EKLEEQA  +EKELILKERETLDVLKELESTKRLVE+                
Sbjct: 61  HTEELDPEKLEEQATVLEKELILKERETLDVLKELESTKRLVENLKSKLQKEESEANLNF 120

Query: 128 XMNVSDQRSIAXXXXXXXNQESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLT 187
             +V +             +    +V+Q SKEG  P     SS+PGLILMEL QAK NL 
Sbjct: 121 QTSVCENILSVKEDEKEDKENGMSNVVQDSKEGCTP---YTSSSPGLILMELKQAKFNLN 177

Query: 188 KTTNDLADVRAAVESLNKKLE 208
           +TT+D+ADVRA+VESLNKKLE
Sbjct: 178 RTTSDIADVRASVESLNKKLE 198


>Glyma11g35930.1 
          Length = 573

 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/190 (44%), Positives = 109/190 (57%), Gaps = 22/190 (11%)

Query: 24  SFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAA 83
           +FR EIDTS PF SVKEAVT FGG G W P  N            IE+ D +K+EEQAA 
Sbjct: 54  NFRAEIDTSPPFGSVKEAVTRFGGSGPWIPFFN-----------NIEDFDLKKVEEQAAE 102

Query: 84  MEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXX 143
           +EK+LI+KE ETLDVL+EL +TKR+VED                 +N  +Q         
Sbjct: 103 LEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCLATQDVNSYEQVGTTVIKEM 162

Query: 144 X-----XNQESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVRA 198
                  N   Q  V+Q      IP+   +SS+P +IL+EL QAKLNL KT N+L  +++
Sbjct: 163 DKENCGSNVNDQEQVMQ------IPSPCSMSSSPDMILIELKQAKLNLGKTINELGVIQS 216

Query: 199 AVESLNKKLE 208
           +VESLNKK++
Sbjct: 217 SVESLNKKMK 226


>Glyma18g44410.1 
          Length = 487

 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/175 (45%), Positives = 88/175 (50%), Gaps = 57/175 (32%)

Query: 48  VGYWKPSSN----------VITC----VGSNSKHRIEELDGEKLEEQAAAMEKELILKER 93
            G W P  +          V  C         KH  EE+  EKLEEQA  +EKELILKER
Sbjct: 2   CGLWDPRDSKNLDVATEIAVADCFLKACSRFKKHHREEVSAEKLEEQAVVLEKELILKER 61

Query: 94  ETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXXXXNQESQLDV 153
           ETLDVLKELESTKRLVED                                          
Sbjct: 62  ETLDVLKELESTKRLVEDLKSK-------------------------------------- 83

Query: 154 LQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVRAAVESLNKKLE 208
           +Q  ++G  PN S+      LILMEL QAKLNLTKTTNDLADV+ +VESLNKKLE
Sbjct: 84  IQKEEKG-KPNESI----ECLILMELKQAKLNLTKTTNDLADVQTSVESLNKKLE 133


>Glyma18g02470.1 
          Length = 439

 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 99/188 (52%), Gaps = 38/188 (20%)

Query: 24  SFRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAA 83
           +FR EIDTS PF SVKEAVT FGG G W P  N            IE  D +K+EEQAA 
Sbjct: 43  NFRAEIDTSPPFGSVKEAVTRFGGSGPWIPYFN-----------NIENFDLKKVEEQAAE 91

Query: 84  MEKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXX 143
           +EK+LI+KE ETLDVL+EL +TKR+VED                 +N             
Sbjct: 92  LEKDLIVKELETLDVLEELGATKRIVEDLKQQLQKEAMKCLATRDVN------------- 138

Query: 144 XXNQESQLDVLQHSKE---GFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVRAAV 200
              +E+   V++   E   G I N             +L +AKLNL KT N+L  +++++
Sbjct: 139 -SYEEAGTPVIKEKDEENCGNIVNDE----------EQLKKAKLNLGKTINELGVIQSSI 187

Query: 201 ESLNKKLE 208
           ESLNKK++
Sbjct: 188 ESLNKKMK 195


>Glyma14g05820.1 
          Length = 493

 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 101/183 (55%), Gaps = 13/183 (7%)

Query: 25  FRTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAM 84
            R EIDTS PF SVKEAVT F   G W P  N      S      E+ D +++EE+AA +
Sbjct: 33  LRAEIDTSPPFGSVKEAVTRFEKTGPWIPLFNFGEAYKS-----AEDFDIKRVEEEAAKL 87

Query: 85  EKELILKERETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXXX 144
           EK+LI+KE ETLDVL+EL +TK ++E+                  N  +Q   A      
Sbjct: 88  EKDLIVKELETLDVLEELGATKAILEELKQQLQSEALNCFATPGGNSYEQVGAAV----- 142

Query: 145 XNQESQLDVLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVRAAVESLN 204
              ++ ++ + + ++         +S+P + +MEL QAK++L KT +DL  ++++VE+LN
Sbjct: 143 ---QNCVNGINNEEQALQCQSPCATSSPDMFMMELGQAKISLGKTISDLGVIQSSVEALN 199

Query: 205 KKL 207
           KK+
Sbjct: 200 KKM 202


>Glyma09g41370.1 
          Length = 437

 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/116 (50%), Positives = 66/116 (56%), Gaps = 31/116 (26%)

Query: 93  RETLDVLKELESTKRLVEDXXXXXXXXXXXXXXXXXMNVSDQRSIAXXXXXXXNQESQLD 152
           RETLDVLKELESTKRLVED                                   +ES+ +
Sbjct: 1   RETLDVLKELESTKRLVEDLKSKIQ----------------------------KEESEAN 32

Query: 153 VLQHSKEGFIPNHSMLSSAPGLILMELNQAKLNLTKTTNDLADVRAAVESLNKKLE 208
           +     + FIP     SS PGLILM+L QAKLNLTKTTNDLADVR +VESLNK+LE
Sbjct: 33  LNLQMGKCFIP---YPSSTPGLILMKLKQAKLNLTKTTNDLADVRTSVESLNKRLE 85


>Glyma06g04270.1 
          Length = 745

 Score = 62.4 bits (150), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 5/86 (5%)

Query: 26  RTEIDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAME 85
           R  IDT+APFESVKEAV+ FGG+  WK  ++ I  V    +  + E + EK +E     +
Sbjct: 118 RGHIDTTAPFESVKEAVSKFGGIVDWK--AHRIHTV---ERRTLVEQELEKAQEDIPEYK 172

Query: 86  KELILKERETLDVLKELESTKRLVED 111
           K+    E+E   VLKEL+STKRL+E+
Sbjct: 173 KQAEAAEQEKGQVLKELDSTKRLIEE 198


>Glyma04g04100.1 
          Length = 973

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 5/83 (6%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+APFESVKEAV+ FGG+  WK  ++ I  V    +  + E + EK +E+    +K+ 
Sbjct: 326 IDTTAPFESVKEAVSKFGGIVDWK--AHRIHTV---ERRTLVEQELEKAQEEIPEYKKQA 380

Query: 89  ILKERETLDVLKELESTKRLVED 111
              E+E   VLKEL+STKRL+E+
Sbjct: 381 ETAEQEKGQVLKELDSTKRLIEE 403


>Glyma14g09080.1 
          Length = 828

 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 5/83 (6%)

Query: 29  IDTSAPFESVKEAVTMFGGVGYWKPSSNVITCVGSNSKHRIEELDGEKLEEQAAAMEKEL 88
           IDT+APFESVK+AV+ FGG+  WK  ++ +  V    KH   ELD   ++++     K+ 
Sbjct: 172 IDTAAPFESVKQAVSKFGGIVDWK--AHRVQTV-ERRKHVEHELD--LVQQEIPECRKKS 226

Query: 89  ILKERETLDVLKELESTKRLVED 111
           ++ E+    VL+EL+STKRL+E+
Sbjct: 227 VVAEQAKTQVLQELDSTKRLIEE 249


>Glyma03g04110.1 
          Length = 157

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 31/42 (73%)

Query: 67  HRIEELDGEKLEEQAAAMEKELILKERETLDVLKELESTKRL 108
           H  EELD EKLEEQAA +EK+LILKERETLD   E E   RL
Sbjct: 2   HHAEELDPEKLEEQAAVLEKDLILKERETLDACGEFEIKGRL 43


>Glyma03g04550.1 
          Length = 247

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/35 (74%), Positives = 31/35 (88%)

Query: 174 LILMELNQAKLNLTKTTNDLADVRAAVESLNKKLE 208
           LILMEL  AK NL +TT+D+ADVRA+VESL+KKLE
Sbjct: 53  LILMELKPAKFNLNRTTSDIADVRASVESLSKKLE 87



 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 26/34 (76%), Positives = 28/34 (82%)

Query: 67  HRIEELDGEKLEEQAAAMEKELILKERETLDVLK 100
           H  EELD EKLEEQA  +EK+LILKERETLD LK
Sbjct: 2   HHAEELDPEKLEEQAVVLEKDLILKERETLDNLK 35