Miyakogusa Predicted Gene

Lj1g3v1943890.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1943890.1 Non Chatacterized Hit- tr|I1JUK8|I1JUK8_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
GN=G,79.44,0,seg,NULL; SUBFAMILY NOT NAMED,NULL; VPRBP
PROTEIN-RELATED,NULL,CUFF.28222.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g07880.1                                                       323   1e-88
Glyma04g07810.1                                                       320   1e-87
Glyma14g16800.1                                                       251   4e-67
Glyma17g29780.1                                                       179   2e-45
Glyma14g16810.1                                                       167   9e-42

>Glyma06g07880.1 
          Length = 1814

 Score =  323 bits (829), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 148/159 (93%), Positives = 151/159 (94%)

Query: 1    MLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRIVPSLD 60
            MLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLR VPSLD
Sbjct: 1541 MLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLD 1600

Query: 61   QTAITFNARGDVMYAILRRNLEVVMSAFDARRVKHPLFAAFRTVDAINYSDIATTPVDRC 120
            QT+ITFNARGDVMYAILRRNLE VMSA   RRVKHPLFAAFRTVDAINYSDIAT PVDRC
Sbjct: 1601 QTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRC 1660

Query: 121  VLDFATEPTDSFVGLITMDDQNEMYASARVYEIGRCRPT 159
            VLDFA EPTDSFVGLITMDDQ+EMYASAR+YEIGR RPT
Sbjct: 1661 VLDFAAEPTDSFVGLITMDDQDEMYASARIYEIGRRRPT 1699


>Glyma04g07810.1 
          Length = 1815

 Score =  320 bits (820), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 147/159 (92%), Positives = 150/159 (94%)

Query: 1    MLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRIVPSLD 60
            MLLWNGVLWDRR SGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLR VPSLD
Sbjct: 1551 MLLWNGVLWDRRDSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRSVPSLD 1610

Query: 61   QTAITFNARGDVMYAILRRNLEVVMSAFDARRVKHPLFAAFRTVDAINYSDIATTPVDRC 120
            QT+ITFNARGDVMYAILRRNLE VMSA   RRVKHPLFAAFRTVDAINYSDIAT PVDRC
Sbjct: 1611 QTSITFNARGDVMYAILRRNLEDVMSAVHTRRVKHPLFAAFRTVDAINYSDIATIPVDRC 1670

Query: 121  VLDFATEPTDSFVGLITMDDQNEMYASARVYEIGRCRPT 159
            VLDFA EPTDSFVGLITMDDQ+EMYASAR+YEIGR RPT
Sbjct: 1671 VLDFAAEPTDSFVGLITMDDQDEMYASARIYEIGRRRPT 1709


>Glyma14g16800.1 
          Length = 589

 Score =  251 bits (642), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 121/151 (80%), Positives = 128/151 (84%), Gaps = 13/151 (8%)

Query: 1   MLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNE-------------VIINSEVWDL 47
           MLLWNGVLWDRRVSGPVH FDQ TD+GGGGFHPAGNE             VIINSEVWDL
Sbjct: 417 MLLWNGVLWDRRVSGPVHHFDQLTDFGGGGFHPAGNEMALAPEVRAVAPEVIINSEVWDL 476

Query: 48  RKFRLLRIVPSLDQTAITFNARGDVMYAILRRNLEVVMSAFDARRVKHPLFAAFRTVDAI 107
           RKFRLLR VPSLDQT ITFNA GDV+YAILRRN+E VMSAF  RRVKHPLFAAFRTVDA+
Sbjct: 477 RKFRLLRSVPSLDQTTITFNAHGDVIYAILRRNIEDVMSAFHTRRVKHPLFAAFRTVDAV 536

Query: 108 NYSDIATTPVDRCVLDFATEPTDSFVGLITM 138
           NYSDIATTPV+ CVLDF TEPTDSFVGL+T+
Sbjct: 537 NYSDIATTPVEHCVLDFTTEPTDSFVGLVTI 567


>Glyma17g29780.1 
          Length = 378

 Score =  179 bits (454), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 96/162 (59%), Positives = 107/162 (66%), Gaps = 37/162 (22%)

Query: 1   MLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVIINSEVWDLRKFRLLRIVPSLD 60
           MLLWNGVL DRRVSGP+HRFDQFTD+GGGGFHPAGNEVIINSEVWDLRKFRLL  VPSLD
Sbjct: 222 MLLWNGVLRDRRVSGPIHRFDQFTDFGGGGFHPAGNEVIINSEVWDLRKFRLLHSVPSLD 281

Query: 61  QTAITFNARGDVMYAILRRNLEVVMSAFDARRVKHPLFAAFRTVDAINYSDIATTPVDRC 120
           Q  ITFNA GDV+YAILRRN+E VMSAF      HP  A                     
Sbjct: 282 QRTITFNAHGDVIYAILRRNIENVMSAF------HPCNA--------------------- 314

Query: 121 VLDFATEPTDSFVGLITMD---------DQNEMYASARVYEI 153
            LDFAT+PTDSFVG +T+          D+       R++E+
Sbjct: 315 -LDFATDPTDSFVGFVTISKRGNYVEGRDEEGTLGCVRIFEL 355


>Glyma14g16810.1 
          Length = 301

 Score =  167 bits (424), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 100/133 (75%), Gaps = 10/133 (7%)

Query: 37  EVIINSEVWDLRKFRLLRIVPSLDQTAITFNARGDVMYAILRRNLEVVMS-AFDARRVKH 95
           +VIINSEVW+LR+FRLL  VPSLDQT ITFNA GDV+YAILR N++ VMS  F  R VKH
Sbjct: 125 QVIINSEVWELRRFRLLLSVPSLDQTTITFNAHGDVIYAILRINIKDVMSDKFHTRWVKH 184

Query: 96  PLFAAFRTVDAINYSDIATTPVDRCVLDFATEPTDSFVGLITMD---------DQNEMYA 146
           PLFAAFR VDAINYSDIAT PVD CV+DFATEPTDSFVGL+TM          D ++M  
Sbjct: 185 PLFAAFRIVDAINYSDIATIPVDDCVIDFATEPTDSFVGLLTMSENDDYVEGGDVDDMCG 244

Query: 147 SARVYEIGRCRPT 159
           +   YEIG   PT
Sbjct: 245 NVIAYEIGYQTPT 257