Miyakogusa Predicted Gene

Lj1g3v1697880.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1697880.1 tr|C4T9C1|C4T9C1_LOTJA SLEEPY1a OS=Lotus
japonicus GN=SLY1a PE=2 SV=1,100,4e-17,seg,NULL,CUFF.27690.1
         (104 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g04540.1                                                        78   2e-15
Glyma06g04640.1                                                        77   5e-15
Glyma17g35610.1                                                        60   5e-10
Glyma14g09560.1                                                        50   6e-07

>Glyma04g04540.1 
          Length = 238

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/42 (90%), Positives = 38/42 (90%), Gaps = 1/42 (2%)

Query: 61  WGPIPPPVIRSKPLPRLGKDEVHLSLSLLSIRYYEKMNFNNR 102
           WGP  P VIRSKPL RLGKDEVHLSLSLLSIRYYEKMNFNNR
Sbjct: 195 WGPTIPQVIRSKPL-RLGKDEVHLSLSLLSIRYYEKMNFNNR 235


>Glyma06g04640.1 
          Length = 174

 Score = 76.6 bits (187), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 37/42 (88%), Positives = 38/42 (90%), Gaps = 1/42 (2%)

Query: 61  WGPIPPPVIRSKPLPRLGKDEVHLSLSLLSIRYYEKMNFNNR 102
           WGP  P +IRSKPL RLGKDEVHLSLSLLSIRYYEKMNFNNR
Sbjct: 131 WGPTVPQMIRSKPL-RLGKDEVHLSLSLLSIRYYEKMNFNNR 171


>Glyma17g35610.1 
          Length = 174

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 31/39 (79%), Positives = 32/39 (82%), Gaps = 2/39 (5%)

Query: 63  PIPPPVIRSKPLPRLGKDEVHLSLSLLSIRYYEKMNFNN 101
           P  P V+RSKP  R GKDEVHLSLSLLSIRYYEKMNF N
Sbjct: 133 PAIPHVLRSKP--RWGKDEVHLSLSLLSIRYYEKMNFLN 169


>Glyma14g09560.1 
          Length = 144

 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 9/73 (12%)

Query: 31  VCGKIHGPGLGCFDDNLLFEVL-----KHVDAKSLWGPIPPPVIRSKPLPRLGKDEVHLS 85
           +C K      GC +  L   +L     + + A  LW P+  P   + P P  GKDEVHLS
Sbjct: 67  ICTK-QWVNTGCAEQQLRSLILALGGFRRLHALYLW-PLSKP--HAPPKPLWGKDEVHLS 122

Query: 86  LSLLSIRYYEKMN 98
           LSLLSIRY+EKMN
Sbjct: 123 LSLLSIRYFEKMN 135