Miyakogusa Predicted Gene

Lj1g3v1650140.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1650140.1 Non Chatacterized Hit- tr|D7KXQ9|D7KXQ9_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,75.61,0.00000000002,seg,NULL; SUBFAMILY NOT NAMED,NULL;
THIOREDOXIN-RELATED,Thioredoxin;
Thioredoxin-like,Thioredoxin-li,CUFF.27639.1
         (213 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g04300.1                                                       286   2e-77
Glyma04g04130.1                                                       217   9e-57
Glyma14g07690.1                                                        58   9e-09
Glyma01g37550.1                                                        57   1e-08
Glyma01g00570.1                                                        57   1e-08
Glyma07g15550.1                                                        57   1e-08
Glyma04g03110.1                                                        57   2e-08
Glyma11g07750.1                                                        56   3e-08
Glyma17g37280.1                                                        54   1e-07
Glyma09g40970.1                                                        54   1e-07
Glyma06g03150.1                                                        51   1e-06

>Glyma06g04300.1 
          Length = 222

 Score =  286 bits (731), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 151/218 (69%), Positives = 169/218 (77%), Gaps = 13/218 (5%)

Query: 1   MPLIAIHTQNHLSFASIKLLLDPCLHGESRTRISHVPFSLVHNRHSHGKLCLGGINIEPS 60
           MP + I  QN  SF +++L        + ++RISHV FSLV  RHSHG LC GG  +EP 
Sbjct: 11  MPQVVISGQNSKSFVNVRL----DTQKKVKSRISHVVFSLV-PRHSHGNLCFGGTKVEPL 65

Query: 61  IKIR------GIRSVAGEYQQXXXXXXXXXVCPVECVREFKTDEEFCKILDKAKRAGSLV 114
           +KIR       IR VA EYQ+         +CPVECVREF TDEEF KILDKAK  GSLV
Sbjct: 66  VKIRHTFFPSRIR-VAEEYQEGLSDEDDD-LCPVECVREFTTDEEFSKILDKAKETGSLV 123

Query: 115 VVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVIDEYDEESEVAERLRIRAVP 174
           VVDFFRTSCGSCKYIEQGFAKLC+KSG+H+APVIFLKHNV+DEYDE+SEVA+RLRIRAVP
Sbjct: 124 VVDFFRTSCGSCKYIEQGFAKLCKKSGDHEAPVIFLKHNVMDEYDEQSEVADRLRIRAVP 183

Query: 175 LFHFYKDGILLEAFPTRDKARIVEAILKYSSLEAEDIL 212
           LFHFYKDG+LLEAFPTRDK RIV AILKYSSLE EDIL
Sbjct: 184 LFHFYKDGVLLEAFPTRDKDRIVAAILKYSSLEREDIL 221


>Glyma04g04130.1 
          Length = 125

 Score =  217 bits (552), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 102/117 (87%), Positives = 111/117 (94%)

Query: 85  VCPVECVREFKTDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHD 144
           +CPVECVREF TDEEF KILDKAK  GSLVVVDFFRTSCGSCKYIEQGFAKLC+KSG+H+
Sbjct: 8   LCPVECVREFTTDEEFSKILDKAKETGSLVVVDFFRTSCGSCKYIEQGFAKLCKKSGDHE 67

Query: 145 APVIFLKHNVIDEYDEESEVAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAIL 201
           APVIFLKHNV+DEYDE+SEVA+RLRIRAVPLFHFYKDG+LLEAFPTRDK RI+ AIL
Sbjct: 68  APVIFLKHNVMDEYDEQSEVADRLRIRAVPLFHFYKDGVLLEAFPTRDKDRILAAIL 124


>Glyma14g07690.1 
          Length = 119

 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 8/113 (7%)

Query: 96  TDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVI 155
           T + + + L   K +  L+VVDF  + CG C++I    A++ R    H   VIFLK +V 
Sbjct: 12  TVDAWNQQLQNGKDSQKLIVVDFTASWCGPCRFIAPVLAEIAR----HTPQVIFLKVDV- 66

Query: 156 DEYDEESEVAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAILKYSSLEA 208
              DE   VAE   I A+P F F KDG +++      K  +   I K+ S  A
Sbjct: 67  ---DEVRPVAEEYSIEAMPTFLFLKDGKIVDKVVGAKKEELQLTIAKHVSAAA 116


>Glyma01g37550.1 
          Length = 120

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 56/108 (51%), Gaps = 8/108 (7%)

Query: 96  TDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVI 155
           T EE+   L K   +  L+VVDF  + CG C++I    A+L +K  +    VIFLK +V 
Sbjct: 15  TVEEWNDQLQKGNESKKLIVVDFTASWCGPCRFIAPFLAELAKKFTS----VIFLKVDV- 69

Query: 156 DEYDEESEVAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAILKY 203
              DE   V++   I A+P F F K+G LL+      K  + + I K+
Sbjct: 70  ---DELKSVSQDWAIEAMPTFVFVKEGTLLDKVVGAKKDELQQKIQKH 114


>Glyma01g00570.1 
          Length = 212

 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 10/87 (11%)

Query: 96  TDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVI 155
           + +EF   L +A     LV+V+F+ T C SC+ +   F KLCR +  H   ++FLK N  
Sbjct: 80  STQEFLSALSQA--GDRLVIVEFYGTWCASCRAL---FPKLCRTAEEHPE-ILFLKVN-- 131

Query: 156 DEYDEESEVAERLRIRAVPLFHFYKDG 182
             +DE   + +RL ++ +P FHFY+  
Sbjct: 132 --FDENKPMCKRLNVKVLPYFHFYRGA 156


>Glyma07g15550.1 
          Length = 219

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 10/85 (11%)

Query: 96  TDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVI 155
           + +EF   + +A     LV+V+F+ T C SC+ +   F KLCR +  H   ++FLK N  
Sbjct: 87  STQEFLSAMSQA--GDRLVIVEFYGTWCASCRAL---FPKLCRTAEEHPE-IVFLKVN-- 138

Query: 156 DEYDEESEVAERLRIRAVPLFHFYK 180
             +DE   + +RL ++ +P FHFY+
Sbjct: 139 --FDENKPMCKRLNVKVLPYFHFYR 161


>Glyma04g03110.1 
          Length = 117

 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 8/111 (7%)

Query: 98  EEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVIDE 157
           EE+ + L K + +  L+VVDF  + CG C++I    A + +K  N    V FLK +V   
Sbjct: 14  EEWEEHLKKGQESKKLIVVDFTASWCGPCRFIAPILADMAKKLPN----VTFLKVDV--- 66

Query: 158 YDEESEVAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAILKYSSLEA 208
            DE + V+    + A+P F F K+G L++      K  + + I+K ++++A
Sbjct: 67  -DELATVSREWEVEAMPTFLFLKEGKLVKKLVGARKEELQDIIVKLAAIDA 116


>Glyma11g07750.1 
          Length = 120

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 8/100 (8%)

Query: 104 LDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVIDEYDEESE 163
           L K  ++  L+VVDF  + CG C++I    A+L +K  +    V+FLK +V    DE   
Sbjct: 23  LQKGNQSKKLIVVDFTASWCGPCRFIAPFLAELAKKFTS----VVFLKVDV----DELKS 74

Query: 164 VAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAILKY 203
           V++   I A+P F F K+G LL       K  + + I KY
Sbjct: 75  VSQDWAIEAMPTFVFVKEGTLLSKVVGAKKDELQQTIEKY 114


>Glyma17g37280.1 
          Length = 123

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 51/91 (56%), Gaps = 8/91 (8%)

Query: 96  TDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVI 155
           T +E+   L  AK +  L+VVDF  + CG C+++    A++ +K+      +IFLK +V 
Sbjct: 14  TVDEWKLQLQNAKDSKKLIVVDFTASWCGPCRFMAPVLAEIAKKTPE----LIFLKVDV- 68

Query: 156 DEYDEESEVAERLRIRAVPLFHFYKDGILLE 186
              DE   VAE   I A+P F F KDG +++
Sbjct: 69  ---DEVRPVAEEYSIEAMPTFLFLKDGEIVD 96


>Glyma09g40970.1 
          Length = 139

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 8/111 (7%)

Query: 91  VREFKTDEEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFL 150
           V+   T E + + L++A+R G +V+ +F  T CG CK I   +++L  K       ++FL
Sbjct: 26  VKLITTKEAWDQSLEEARRGGKIVIANFSATWCGPCKMIAPYYSELSEKY----TSMMFL 81

Query: 151 KHNVIDEYDEESEVAERLRIRAVPLFHFYKDGILLEAFPTRDKARIVEAIL 201
             +V    D+ ++ +    I+A P F F KDG  L+     +K  +++ I+
Sbjct: 82  LVDV----DDLTDFSTSWDIKATPTFFFLKDGQQLDKLVGANKPELLKKIV 128


>Glyma06g03150.1 
          Length = 117

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 8/89 (8%)

Query: 98  EEFCKILDKAKRAGSLVVVDFFRTSCGSCKYIEQGFAKLCRKSGNHDAPVIFLKHNVIDE 157
           EE+ + L K + +  L+VVDF  + CG C++I    A+  +K  N    V FLK +V   
Sbjct: 14  EEWKEHLKKGEESKKLIVVDFTASWCGPCRFIAPILAEFAKKLPN----VTFLKVDV--- 66

Query: 158 YDEESEVAERLRIRAVPLFHFYKDGILLE 186
            DE   V++   I A+P F F K+G L++
Sbjct: 67  -DELETVSKEWGIEAMPTFLFLKEGKLVD 94