Miyakogusa Predicted Gene

Lj1g3v1008950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v1008950.1 Non Chatacterized Hit- tr|I1JYZ6|I1JYZ6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,50,0.000000003,
,CUFF.26663.1
         (72 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g42210.1                                                        66   9e-12
Glyma06g12590.1                                                        65   1e-11

>Glyma04g42210.1 
          Length = 643

 Score = 65.9 bits (159), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 8/68 (11%)

Query: 1   MWSCHRAPRAGSSAVRSGQV-----TELLPDKFMCSMLMDVCSNLRYLDKGKQFYTFCFK 55
           +W+CHRA   G   +   Q       E LPD+F CS+LM VCSNLR LDKGKQ + FCFK
Sbjct: 218 IWACHRA---GHHELALEQFYWMRGAEFLPDQFTCSVLMSVCSNLRDLDKGKQVFAFCFK 274

Query: 56  CIYLQNEI 63
             ++ N I
Sbjct: 275 MGFVYNSI 282


>Glyma06g12590.1 
          Length = 1060

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 8/68 (11%)

Query: 1   MWSCHRAPRAGSSAVRSGQV-----TELLPDKFMCSMLMDVCSNLRYLDKGKQFYTFCFK 55
           +W+CH A   G   +   Q       ELLPD+F CS+LM VCSNLR LDKGKQ + FCFK
Sbjct: 648 IWACHSA---GHHELALEQFYRMRGAELLPDQFTCSVLMSVCSNLRDLDKGKQVFAFCFK 704

Query: 56  CIYLQNEI 63
             ++ N I
Sbjct: 705 MGFIYNSI 712