Miyakogusa Predicted Gene

Lj1g3v0715520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v0715520.1 Non Chatacterized Hit- tr|I0YKX0|I0YKX0_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,36.8,3e-18,seg,NULL,CUFF.26201.1
         (206 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g23160.1                                                       295   3e-80
Glyma16g23160.2                                                       173   9e-44

>Glyma16g23160.1 
          Length = 213

 Score =  295 bits (754), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 156/217 (71%), Positives = 169/217 (77%), Gaps = 15/217 (6%)

Query: 1   MAFAHNLLPIPAKPSPKCXXXXXXXXXXXXXXXXXXRAQN-----------HSLAFTTLR 49
           MAFAH LL +P +PSP                     + +           HSL F+  R
Sbjct: 1   MAFAHYLLAVPVEPSPNFPTNPPKPNPSLSSSSSSSISSHCFNLSSSLRPKHSL-FSRFR 59

Query: 50  RIINHKAKATPQEPEVSAGAAIDAFTQFKHLLLPITDRNPYLSEGTRQAISTTTALAKKY 109
           RI  HKAKA PQEPEV+  +  DAFTQFKHLLLPITDRNPYLSEGTRQAI+TT+ALAKKY
Sbjct: 60  RIC-HKAKAKPQEPEVTVAS--DAFTQFKHLLLPITDRNPYLSEGTRQAIATTSALAKKY 116

Query: 110 GADITVVVIDEQQKESLPEHETQLSSIRWHISEGGFKDYNLLERLGEGSKPTAIIGDVAD 169
           GADITVVVID QQKESLPEHETQLSSIRWH+SEGG KDYNLLERLG+G+KPTAIIGDVAD
Sbjct: 117 GADITVVVIDAQQKESLPEHETQLSSIRWHLSEGGLKDYNLLERLGDGNKPTAIIGDVAD 176

Query: 170 ELNLDLVVISMEAIHTKHIDANLLAEFIPCPVMLLPL 206
           +LNLDLVVISMEAIHTKHIDANLLAEFIPCPVMLLPL
Sbjct: 177 DLNLDLVVISMEAIHTKHIDANLLAEFIPCPVMLLPL 213


>Glyma16g23160.2 
          Length = 151

 Score =  173 bits (439), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 97/154 (62%), Positives = 107/154 (69%), Gaps = 15/154 (9%)

Query: 1   MAFAHNLLPIPAKPSPKCXXXXXXXXXXXXXXXXXXRAQN-----------HSLAFTTLR 49
           MAFAH LL +P +PSP                     + +           HSL F+  R
Sbjct: 1   MAFAHYLLAVPVEPSPNFPTNPPKPNPSLSSSSSSSISSHCFNLSSSLRPKHSL-FSRFR 59

Query: 50  RIINHKAKATPQEPEVSAGAAIDAFTQFKHLLLPITDRNPYLSEGTRQAISTTTALAKKY 109
           RI  HKAKA PQEPEV+  +  DAFTQFKHLLLPITDRNPYLSEGTRQAI+TT+ALAKKY
Sbjct: 60  RIC-HKAKAKPQEPEVTVAS--DAFTQFKHLLLPITDRNPYLSEGTRQAIATTSALAKKY 116

Query: 110 GADITVVVIDEQQKESLPEHETQLSSIRWHISEG 143
           GADITVVVID QQKESLPEHETQLSSIRWH+SEG
Sbjct: 117 GADITVVVIDAQQKESLPEHETQLSSIRWHLSEG 150