Miyakogusa Predicted Gene

Lj0g3v0349259.1
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0349259.1 Non Chatacterized Hit- tr|I1M579|I1M579_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,60.26,0.00000000000009, ,CUFF.23986.1
         (61 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g42110.1                                                        81   2e-16
Glyma15g03280.1                                                        77   4e-15

>Glyma13g42110.1 
          Length = 371

 Score = 81.3 bits (199), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 47/78 (60%), Positives = 55/78 (70%), Gaps = 17/78 (21%)

Query: 1   MLEAESLEKVLPGVESVEEGNK-YRG----------------LKYEGVQGLLGIIHTTGT 43
           +LEAESL KVLPGVES EEG K YR                 L++EGVQ LLG++HTTGT
Sbjct: 173 LLEAESLGKVLPGVESSEEGVKVYRRFYTEKEQANGVLALIELRHEGVQSLLGLMHTTGT 232

Query: 44  VPNALPPPRSSLLASFNL 61
           +P+ALPPP S+LLASFNL
Sbjct: 233 IPSALPPPISTLLASFNL 250


>Glyma15g03280.1 
          Length = 400

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/96 (48%), Positives = 52/96 (54%), Gaps = 35/96 (36%)

Query: 1   MLEAESLEKVLPGVESVEEGNK-----------------------------------YRG 25
           MLEAESL KVLPGVES EEG K                                   +  
Sbjct: 200 MLEAESLGKVLPGVESSEEGVKVYQRFCTEEKEQANGVLAIVVSKFTPQPYDSLARLFCE 259

Query: 26  LKYEGVQGLLGIIHTTGTVPNALPPPRSSLLASFNL 61
           L YEGVQ LLG++HTTGT+PNALPPP S+LLASFN 
Sbjct: 260 LSYEGVQSLLGLMHTTGTIPNALPPPISTLLASFNF 295