Miyakogusa Predicted Gene
- Lj0g3v0332199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0332199.1 Non Chatacterized Hit- tr|A3BBU9|A3BBU9_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,44.33,4e-17,FAMILY NOT NAMED,NULL;
Homeobox,Homeodomain,CUFF.22642.1
(262 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma07g01880.2 316 2e-86
Glyma07g01880.1 316 2e-86
Glyma08g21560.3 308 3e-84
Glyma08g21560.2 308 3e-84
Glyma08g21560.1 308 3e-84
Glyma04g09100.1 164 6e-41
Glyma04g09100.2 162 3e-40
Glyma06g09200.1 160 9e-40
Glyma12g18490.1 154 7e-38
Glyma06g35560.1 145 4e-35
Glyma04g09100.3 58 1e-08
>Glyma07g01880.2
Length = 273
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/276 (56%), Positives = 203/276 (73%), Gaps = 17/276 (6%)
Query: 1 MVELSLIDSPFPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISW 55
M +L L +SPFPKLS+D++LELERIY DMG ++ C EIA S A TS+SW
Sbjct: 1 MEKLGLTESPFPKLSSDEILELERIYEDMGGKVLNRKSCLEIAKRFSSSSNGAGKTSLSW 60
Query: 56 EQVQQWFQN--KLHESQDRAAS--LNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARS 111
+QV+ WF+N ++ +D ++S L D++++P L + +G + A + DL FEARS
Sbjct: 61 QQVRLWFKNNQRMLLGKDISSSDLLKISADLAESPLLGNG---KGKQAAALDDLGFEARS 117
Query: 112 TKDLAWHDVSMLLNYRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHK 171
TKD+AWHDVSM LNYRVLSTGELE RVRYAGFGK +DEW+NVK GVR+RSIPLEP+ECHK
Sbjct: 118 TKDIAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLGVRERSIPLEPSECHK 177
Query: 172 GKEGDLVLCFPERDDYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEEAIHWERVC 231
K+GDLVLCF ER+DYALYCDAR++ I RK HD T+C C + VRF+HDN+EE + ++R+C
Sbjct: 178 VKDGDLVLCFLEREDYALYCDARIVKIHRKIHDPTECTCTFIVRFVHDNTEEGVSFDRIC 237
Query: 232 YRPTQEESVVYHN-SPEPTIEPSMSA----IENLWG 262
RPTQEES Y + + +PT PS++ IE+LWG
Sbjct: 238 CRPTQEESACYPDLALDPTSSPSLNVTLNTIESLWG 273
>Glyma07g01880.1
Length = 273
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/276 (56%), Positives = 203/276 (73%), Gaps = 17/276 (6%)
Query: 1 MVELSLIDSPFPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISW 55
M +L L +SPFPKLS+D++LELERIY DMG ++ C EIA S A TS+SW
Sbjct: 1 MEKLGLTESPFPKLSSDEILELERIYEDMGGKVLNRKSCLEIAKRFSSSSNGAGKTSLSW 60
Query: 56 EQVQQWFQN--KLHESQDRAAS--LNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARS 111
+QV+ WF+N ++ +D ++S L D++++P L + +G + A + DL FEARS
Sbjct: 61 QQVRLWFKNNQRMLLGKDISSSDLLKISADLAESPLLGNG---KGKQAAALDDLGFEARS 117
Query: 112 TKDLAWHDVSMLLNYRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHK 171
TKD+AWHDVSM LNYRVLSTGELE RVRYAGFGK +DEW+NVK GVR+RSIPLEP+ECHK
Sbjct: 118 TKDIAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLGVRERSIPLEPSECHK 177
Query: 172 GKEGDLVLCFPERDDYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEEAIHWERVC 231
K+GDLVLCF ER+DYALYCDAR++ I RK HD T+C C + VRF+HDN+EE + ++R+C
Sbjct: 178 VKDGDLVLCFLEREDYALYCDARIVKIHRKIHDPTECTCTFIVRFVHDNTEEGVSFDRIC 237
Query: 232 YRPTQEESVVYHN-SPEPTIEPSMSA----IENLWG 262
RPTQEES Y + + +PT PS++ IE+LWG
Sbjct: 238 CRPTQEESACYPDLALDPTSSPSLNVTLNTIESLWG 273
>Glyma08g21560.3
Length = 273
Score = 308 bits (790), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 196/276 (71%), Gaps = 17/276 (6%)
Query: 1 MVELSLIDSPFPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISW 55
M +L L + PFPKLS D++LELERIY D+ F++ LCQEIA S A S+SW
Sbjct: 1 MEKLPLTEYPFPKLSLDEILELERIYKDVVGKVFNRKLCQEIAKRFSSSSNGAGKNSLSW 60
Query: 56 EQVQQWFQNK----LHESQDRAASLNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARS 111
+QVQ WF+N L E + L D++D+P L + +G + + D+ FEARS
Sbjct: 61 QQVQLWFRNSQRMLLGEDISSSDLLKISADLADSPLLGNG---KGKQATDLDDMGFEARS 117
Query: 112 TKDLAWHDVSMLLNYRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHK 171
TKD AWHDVSM LNYRVLSTGELE RVRYAGFGK +DEW+NVK GVR+RSIPLEP+ECHK
Sbjct: 118 TKDNAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLGVRERSIPLEPSECHK 177
Query: 172 GKEGDLVLCFPERDDYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEEAIHWERVC 231
K+GDLVLCF E++DYALYCDAR++ IQRK HD TDC C + V+F+HDN+EE + + R+C
Sbjct: 178 VKDGDLVLCFLEKEDYALYCDARIVKIQRKIHDPTDCTCTFIVQFVHDNTEEGVSFSRIC 237
Query: 232 YRPTQEESVVYHN-SPEPTIEPS----MSAIENLWG 262
RPTQEES + + + +PT PS ++ IE+LWG
Sbjct: 238 CRPTQEESACFPDLALDPTQSPSLNFPLNTIESLWG 273
>Glyma08g21560.2
Length = 273
Score = 308 bits (790), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 196/276 (71%), Gaps = 17/276 (6%)
Query: 1 MVELSLIDSPFPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISW 55
M +L L + PFPKLS D++LELERIY D+ F++ LCQEIA S A S+SW
Sbjct: 1 MEKLPLTEYPFPKLSLDEILELERIYKDVVGKVFNRKLCQEIAKRFSSSSNGAGKNSLSW 60
Query: 56 EQVQQWFQNK----LHESQDRAASLNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARS 111
+QVQ WF+N L E + L D++D+P L + +G + + D+ FEARS
Sbjct: 61 QQVQLWFRNSQRMLLGEDISSSDLLKISADLADSPLLGNG---KGKQATDLDDMGFEARS 117
Query: 112 TKDLAWHDVSMLLNYRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHK 171
TKD AWHDVSM LNYRVLSTGELE RVRYAGFGK +DEW+NVK GVR+RSIPLEP+ECHK
Sbjct: 118 TKDNAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLGVRERSIPLEPSECHK 177
Query: 172 GKEGDLVLCFPERDDYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEEAIHWERVC 231
K+GDLVLCF E++DYALYCDAR++ IQRK HD TDC C + V+F+HDN+EE + + R+C
Sbjct: 178 VKDGDLVLCFLEKEDYALYCDARIVKIQRKIHDPTDCTCTFIVQFVHDNTEEGVSFSRIC 237
Query: 232 YRPTQEESVVYHN-SPEPTIEPS----MSAIENLWG 262
RPTQEES + + + +PT PS ++ IE+LWG
Sbjct: 238 CRPTQEESACFPDLALDPTQSPSLNFPLNTIESLWG 273
>Glyma08g21560.1
Length = 273
Score = 308 bits (790), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/276 (55%), Positives = 196/276 (71%), Gaps = 17/276 (6%)
Query: 1 MVELSLIDSPFPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISW 55
M +L L + PFPKLS D++LELERIY D+ F++ LCQEIA S A S+SW
Sbjct: 1 MEKLPLTEYPFPKLSLDEILELERIYKDVVGKVFNRKLCQEIAKRFSSSSNGAGKNSLSW 60
Query: 56 EQVQQWFQNK----LHESQDRAASLNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARS 111
+QVQ WF+N L E + L D++D+P L + +G + + D+ FEARS
Sbjct: 61 QQVQLWFRNSQRMLLGEDISSSDLLKISADLADSPLLGNG---KGKQATDLDDMGFEARS 117
Query: 112 TKDLAWHDVSMLLNYRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHK 171
TKD AWHDVSM LNYRVLSTGELE RVRYAGFGK +DEW+NVK GVR+RSIPLEP+ECHK
Sbjct: 118 TKDNAWHDVSMFLNYRVLSTGELEVRVRYAGFGKEQDEWMNVKLGVRERSIPLEPSECHK 177
Query: 172 GKEGDLVLCFPERDDYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEEAIHWERVC 231
K+GDLVLCF E++DYALYCDAR++ IQRK HD TDC C + V+F+HDN+EE + + R+C
Sbjct: 178 VKDGDLVLCFLEKEDYALYCDARIVKIQRKIHDPTDCTCTFIVQFVHDNTEEGVSFSRIC 237
Query: 232 YRPTQEESVVYHN-SPEPTIEPS----MSAIENLWG 262
RPTQEES + + + +PT PS ++ IE+LWG
Sbjct: 238 CRPTQEESACFPDLALDPTQSPSLNFPLNTIESLWG 273
>Glyma04g09100.1
Length = 231
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 125/218 (57%), Gaps = 16/218 (7%)
Query: 11 FPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISWEQVQQWFQNK 65
F + ++ ++E++ + + + Q++A + + A I W +++ WFQ +
Sbjct: 12 FSGFTNAEIEKMEKLLREPTGGSLGKEFYQKLARSFNYSSGRAGKPIIKWTEIESWFQTR 71
Query: 66 LHESQDRAASLNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARSTKDLAWHDVSMLLN 125
L +S +S +L+ P + +Q S+L FEARS+KD AW+DV L
Sbjct: 72 LQDSPQVPSS--ELM----VPKCKEGETMQHP-----SELEFEARSSKDGAWYDVEAFLA 120
Query: 126 YRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHKGKEGDLVLCFPERD 185
+R LSTGE E VR+ GFG EDEW+N+K VR RSIPLE EC K GD VLCF ER
Sbjct: 121 HRFLSTGEAEVHVRFVGFGADEDEWINIKTSVRQRSIPLESTECSNLKMGDPVLCFQERR 180
Query: 186 DYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEE 223
D A+Y DA ++ IQR+ HD C+C+ +R+ HDNSEE
Sbjct: 181 DQAIYYDAHIVEIQRRMHDIRGCRCLILIRYDHDNSEE 218
>Glyma04g09100.2
Length = 209
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/207 (41%), Positives = 120/207 (57%), Gaps = 16/207 (7%)
Query: 22 LERIYNDMGENAFDQNLCQEIAATLS-----AANTSISWEQVQQWFQNKLHESQDRAASL 76
+E++ + + + Q++A + + A I W +++ WFQ +L +S +S
Sbjct: 1 MEKLLREPTGGSLGKEFYQKLARSFNYSSGRAGKPIIKWTEIESWFQTRLQDSPQVPSS- 59
Query: 77 NQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARSTKDLAWHDVSMLLNYRVLSTGELEA 136
+L+ P + +Q S+L FEARS+KD AW+DV L +R LSTGE E
Sbjct: 60 -ELM----VPKCKEGETMQHP-----SELEFEARSSKDGAWYDVEAFLAHRFLSTGEAEV 109
Query: 137 RVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHKGKEGDLVLCFPERDDYALYCDARVL 196
VR+ GFG EDEW+N+K VR RSIPLE EC K GD VLCF ER D A+Y DA ++
Sbjct: 110 HVRFVGFGADEDEWINIKTSVRQRSIPLESTECSNLKMGDPVLCFQERRDQAIYYDAHIV 169
Query: 197 SIQRKQHDETDCKCIYTVRFLHDNSEE 223
IQR+ HD C+C+ +R+ HDNSEE
Sbjct: 170 EIQRRMHDIRGCRCLILIRYDHDNSEE 196
>Glyma06g09200.1
Length = 231
Score = 160 bits (406), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 125/218 (57%), Gaps = 16/218 (7%)
Query: 11 FPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISWEQVQQWFQNK 65
F + ++ ++E++ + + + Q++A + + A I W +++ WFQ +
Sbjct: 12 FSGFTNAEIEKMEKLLREPTGGSLGREFYQKLARSFNYSSGRAGKPIIKWTEIESWFQTR 71
Query: 66 LHESQDRAASLNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARSTKDLAWHDVSMLLN 125
L +S +S +L+ P + +Q S+L FEARS+KD AW+DV L
Sbjct: 72 LQDSPQVPSS--ELM----VPKCKEGETMQDP-----SELEFEARSSKDGAWYDVEAFLA 120
Query: 126 YRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHKGKEGDLVLCFPERD 185
+R LSTGE E +VR+ GFG EDEW+N+K VR RSIPLE EC K GD VLCF ER
Sbjct: 121 HRFLSTGEAEVQVRFVGFGAEEDEWINIKTSVRQRSIPLESTECSNLKIGDPVLCFQERR 180
Query: 186 DYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEE 223
D A+Y DA ++ IQ++ HD C+C+ + + HDNSEE
Sbjct: 181 DQAIYYDAHIVEIQKRMHDIRGCRCLLLIHYDHDNSEE 218
>Glyma12g18490.1
Length = 369
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 127/231 (54%), Gaps = 8/231 (3%)
Query: 9 SPFPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISWEQVQQWFQ 63
P + + ++ E+E I + +++ +A S ++ +QV WFQ
Sbjct: 9 GPAFRFTQPEVAEMEAILQEHNNAMPSRDVLTTLAEKFSESQDRKGKIAVQMKQVWNWFQ 68
Query: 64 NKLHESQDRAASLNQLVDISDTPSLRSSTVLQGNRGAVVSDLAFEARSTKDLAWHDVSML 123
NK + + +++ ++I+ P + V +V L FEA+S +D AW+DV+
Sbjct: 69 NKRYAIRAKSSKTPGKLNITPMPRGVPTAVKATPENSV---LEFEAKSGRDGAWYDVATF 125
Query: 124 LNYRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSIPLEPAECHKGKEGDLVLCFPE 183
L++R L T + E VR+AGFG EDEW+N++ VR RS+P E +EC GDL+LCF E
Sbjct: 126 LSHRYLETSDPEVLVRFAGFGPEEDEWINIRKHVRPRSLPCESSECVVVIPGDLILCFQE 185
Query: 184 RDDYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSEEAIHWERVCYRP 234
+ ALY DA VL QR++HD C+C + VR+ HD SEE + ++C RP
Sbjct: 186 GKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKICRRP 236
>Glyma06g35560.1
Length = 295
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 27/252 (10%)
Query: 10 PFPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISWEQVQQWFQN 64
P + + ++ E+E I + +++ +A S S+ +QV WFQN
Sbjct: 10 PAFRFTQPEVSEMEAILQEHNNAMPSRDVLTALAEKFSESQDRKGKISVQMKQVWNWFQN 69
Query: 65 KLHESQDRAASLNQLVDISDTP---------------------SLRSSTVLQGNRGAVV- 102
K + + +++ ++I+ P S+TV +
Sbjct: 70 KRYAIRAKSSKTPGKLNITPMPRDDYNSTPIRSMPQQPTAASIPAASATVPTAVKATTEN 129
Query: 103 SDLAFEARSTKDLAWHDVSMLLNYRVLSTGELEARVRYAGFGKGEDEWVNVKYGVRDRSI 162
S + FEA+S +D AW+DV+ L++R L T + E VR+AGFG EDEW+N++ VR RS+
Sbjct: 130 SVMEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINIRKHVRPRSL 189
Query: 163 PLEPAECHKGKEGDLVLCFPERDDYALYCDARVLSIQRKQHDETDCKCIYTVRFLHDNSE 222
P E +EC GDL+LCF E + ALY DA VL QR++HD C+C + VR+ HD SE
Sbjct: 190 PCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSE 249
Query: 223 EAIHWERVCYRP 234
E + ++C RP
Sbjct: 250 EIVPLRKICRRP 261
>Glyma04g09100.3
Length = 165
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 26/133 (19%)
Query: 11 FPKLSTDQMLELERIYNDMGENAFDQNLCQEIAATLS-----AANTSISWEQVQQWFQNK 65
F + ++ ++E++ + + + Q++A + + A I W +++ WFQ +
Sbjct: 12 FSGFTNAEIEKMEKLLREPTGGSLGKEFYQKLARSFNYSSGRAGKPIIKWTEIESWFQTR 71
Query: 66 LHESQDRAASLNQLVDISDTPSLRSSTVL-----QGNRGAVVSDLAFEARSTKDLAWHDV 120
L D+P + SS ++ +G S+L FEARS+KD AW+DV
Sbjct: 72 LQ----------------DSPQVPSSELMVPKCKEGETMQHPSELEFEARSSKDGAWYDV 115
Query: 121 SMLLNYRVLSTGE 133
L +R LSTGE
Sbjct: 116 EAFLAHRFLSTGE 128