Miyakogusa Predicted Gene

Lj0g3v0317559.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0317559.2 Non Chatacterized Hit- tr|I1PJV6|I1PJV6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,40.1,4e-19,SAGA-Tad1,Transcriptional coactivator SAGA-type
complex, Ada1/Tada1; SUBFAMILY NOT NAMED,NULL; FAMIL,CUFF.21554.2
         (202 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g17620.1                                                       320   8e-88
Glyma17g29280.1                                                       303   1e-82
Glyma17g29280.2                                                       302   2e-82
Glyma04g07970.1                                                       285   2e-77
Glyma06g08020.1                                                       282   2e-76
Glyma20g26860.1                                                       107   9e-24
Glyma05g22170.1                                                       107   1e-23
Glyma10g40470.1                                                       105   3e-23
Glyma17g17720.1                                                       103   8e-23

>Glyma14g17620.1 
          Length = 418

 Score =  320 bits (819), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 160/197 (81%), Positives = 172/197 (87%), Gaps = 3/197 (1%)

Query: 6   IVEDGEEVEQLNRLSFARSPLIAPLGIPHCSASVGGARKSLPVNSASDFVSFCDSGSLPD 65
           IVEDGEEVEQLNRL+F+RSPLIAPLGIP+C+ASVGGARK+LPVNS SDFVS CDSG L D
Sbjct: 225 IVEDGEEVEQLNRLNFSRSPLIAPLGIPYCTASVGGARKALPVNSTSDFVSCCDSGRLSD 284

Query: 66  TDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSARSANENEPTKL 125
           TDTLRRRMEQI TV GLGGVS ECANMLNNVLD YLKRLIRSCVDLV ARS   NEP KL
Sbjct: 285 TDTLRRRMEQITTVLGLGGVSRECANMLNNVLDVYLKRLIRSCVDLVGARSG--NEPRKL 342

Query: 126 PVSKPQIQGKIMNGMWPNNQSHVQQSPGGPAEPELEHRPQISISLHDFKVAMELNPQQLG 185
           PVSK QIQGK++NG+WPNN  HV  S GG AEPE EH P  S+SLHDFKVAMELNPQQLG
Sbjct: 343 PVSKQQIQGKVINGIWPNNHLHV-PSAGGLAEPEPEHTPPHSVSLHDFKVAMELNPQQLG 401

Query: 186 EDWPLQLEKLSMQSLEK 202
           EDWPLQLEK+S+QS E+
Sbjct: 402 EDWPLQLEKISVQSFEE 418


>Glyma17g29280.1 
          Length = 865

 Score =  303 bits (775), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 160/203 (78%), Positives = 175/203 (86%), Gaps = 5/203 (2%)

Query: 2   SKTPIVEDGEEVEQLNRLSFARSPLIAPLGIPHCSASVGGARKSLPVNSASDFVSFCDSG 61
           ++  IVEDGEEVEQLN L+F+RSPLIAPLGIP+C+ASVGGARK+L VNS  DFVS CDSG
Sbjct: 666 TEVSIVEDGEEVEQLNHLNFSRSPLIAPLGIPYCTASVGGARKALTVNSTGDFVSCCDSG 725

Query: 62  SLPDTDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSARSANENE 121
            L DTDTLRRRMEQIATVQGLGGVS ECANMLNNVLD YLKRLIRSCVDLV ARS   NE
Sbjct: 726 RLSDTDTLRRRMEQIATVQGLGGVSTECANMLNNVLDVYLKRLIRSCVDLVGARSG--NE 783

Query: 122 PTKLPVSKPQIQGKIMNGMWPNNQSHVQQSPGGPA--EPELEHRPQISISLHDFKVAMEL 179
           P KLPVSK QIQGK++NG+WPNN  HV QS GG A  EPE EHRP  ++SLHDFKVAMEL
Sbjct: 784 PRKLPVSKQQIQGKVINGVWPNNHLHV-QSAGGMAEPEPEPEHRPPRTVSLHDFKVAMEL 842

Query: 180 NPQQLGEDWPLQLEKLSMQSLEK 202
           NPQQLGEDWPLQLEK+SMQS ++
Sbjct: 843 NPQQLGEDWPLQLEKISMQSFDE 865


>Glyma17g29280.2 
          Length = 420

 Score =  302 bits (773), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 160/203 (78%), Positives = 175/203 (86%), Gaps = 5/203 (2%)

Query: 2   SKTPIVEDGEEVEQLNRLSFARSPLIAPLGIPHCSASVGGARKSLPVNSASDFVSFCDSG 61
           ++  IVEDGEEVEQLN L+F+RSPLIAPLGIP+C+ASVGGARK+L VNS  DFVS CDSG
Sbjct: 221 TEVSIVEDGEEVEQLNHLNFSRSPLIAPLGIPYCTASVGGARKALTVNSTGDFVSCCDSG 280

Query: 62  SLPDTDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSARSANENE 121
            L DTDTLRRRMEQIATVQGLGGVS ECANMLNNVLD YLKRLIRSCVDLV ARS   NE
Sbjct: 281 RLSDTDTLRRRMEQIATVQGLGGVSTECANMLNNVLDVYLKRLIRSCVDLVGARSG--NE 338

Query: 122 PTKLPVSKPQIQGKIMNGMWPNNQSHVQQSPGGPA--EPELEHRPQISISLHDFKVAMEL 179
           P KLPVSK QIQGK++NG+WPNN  HV QS GG A  EPE EHRP  ++SLHDFKVAMEL
Sbjct: 339 PRKLPVSKQQIQGKVINGVWPNNHLHV-QSAGGMAEPEPEPEHRPPRTVSLHDFKVAMEL 397

Query: 180 NPQQLGEDWPLQLEKLSMQSLEK 202
           NPQQLGEDWPLQLEK+SMQS ++
Sbjct: 398 NPQQLGEDWPLQLEKISMQSFDE 420


>Glyma04g07970.1 
          Length = 419

 Score =  285 bits (729), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 145/197 (73%), Positives = 161/197 (81%), Gaps = 3/197 (1%)

Query: 6   IVEDGEEVEQLNRLSFARSPLIAPLGIPHCSASVGGARKSLPVNSASDFVSFCDSGSLPD 65
           IVEDGEEV+QL+RL F+RSPLIAPLGIP+CSASVGGARK+LPV+SA DF S CDSG L D
Sbjct: 226 IVEDGEEVDQLSRLGFSRSPLIAPLGIPYCSASVGGARKTLPVSSAGDFDSCCDSGRLSD 285

Query: 66  TDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSARSANENEPTKL 125
           TDTLRRRMEQIA VQGLG VSMECANMLN++LD YLKRLIRSCV+LV  RS NE      
Sbjct: 286 TDTLRRRMEQIAAVQGLGAVSMECANMLNSMLDVYLKRLIRSCVELVGTRSTNELRKPLA 345

Query: 126 PVSKPQIQGKIMNGMWPNNQSHVQQSPGGPAEPELEHRPQISISLHDFKVAMELNPQQLG 185
           P  K Q+QGK++N MWPNN  HV Q  GG AE   EHRP  S+SLHDFKVAMELNP+QLG
Sbjct: 346 P--KQQMQGKVINDMWPNNHLHV-QCAGGSAEAVPEHRPPCSVSLHDFKVAMELNPRQLG 402

Query: 186 EDWPLQLEKLSMQSLEK 202
           ED PL LEK+SMQS E+
Sbjct: 403 EDCPLLLEKISMQSFEE 419


>Glyma06g08020.1 
          Length = 419

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 142/197 (72%), Positives = 163/197 (82%), Gaps = 3/197 (1%)

Query: 6   IVEDGEEVEQLNRLSFARSPLIAPLGIPHCSASVGGARKSLPVNSASDFVSFCDSGSLPD 65
           IVEDGEEV+QL+RL F+RSPLIAPLGIP+CSASVGGARK+LPV+SA DF + CDSG L D
Sbjct: 226 IVEDGEEVDQLSRLGFSRSPLIAPLGIPYCSASVGGARKTLPVSSAGDFDNCCDSGRLSD 285

Query: 66  TDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSARSANENEPTKL 125
           T+TL+RRMEQIA VQGLG VSMECANMLN++LD YLKRLIRSCV+LV ARS NE      
Sbjct: 286 TNTLQRRMEQIAAVQGLGAVSMECANMLNSMLDVYLKRLIRSCVELVGARSTNELRMP-- 343

Query: 126 PVSKPQIQGKIMNGMWPNNQSHVQQSPGGPAEPELEHRPQISISLHDFKVAMELNPQQLG 185
           P  K Q+QGK++NGMWPNN  HVQ + G  AE   EHRP  S+ LHDFKVAMELNP+QLG
Sbjct: 344 PAPKQQMQGKVINGMWPNNHLHVQCADGS-AEGVPEHRPPCSVFLHDFKVAMELNPRQLG 402

Query: 186 EDWPLQLEKLSMQSLEK 202
           EDWPL +EK+SMQS E+
Sbjct: 403 EDWPLLMEKISMQSFEE 419


>Glyma20g26860.1 
          Length = 356

 Score =  107 bits (267), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/212 (39%), Positives = 115/212 (54%), Gaps = 38/212 (17%)

Query: 2   SKTPI-VEDGEEVEQLNRLSF--ARSPLIAPLGIPHCSASVGGARKSLPVN---SASDFV 55
           S+ PI VE+GEEVEQ+       +RSP+ APLG+   S + G  R+ L  N    + D+ 
Sbjct: 172 SRPPISVEEGEEVEQMAGSPSIQSRSPVTAPLGV---SMNFGRGRR-LHSNVSLCSKDYP 227

Query: 56  SFCDS-GSLPDTDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSA 114
             C S G LPDT +LR  +EQ    +GL   +++C N+LNN LDSYLKRLI S +DL  +
Sbjct: 228 ETCHSNGYLPDTRSLRNCLEQKLEKEGLTA-TVDCVNLLNNALDSYLKRLIESFMDLAGS 286

Query: 115 RSANENEPTKLPVSKPQIQGKIMNGMWPNNQSHVQQS----PGGPAEPELEHRPQISISL 170
           R  NE+                   +   N+  V  S    PG   +         S S+
Sbjct: 287 RFGNEH-------------------LRQQNRQLVTSSNVLLPGRCMQTATR---SASASV 324

Query: 171 HDFKVAMELNPQQLGEDWPLQLEKLSMQSLEK 202
            DF++AMELNPQ LG DWP+QLEK+ +++ E+
Sbjct: 325 LDFRLAMELNPQVLGPDWPIQLEKICIRASEE 356


>Glyma05g22170.1 
          Length = 242

 Score =  107 bits (266), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 112/201 (55%), Gaps = 33/201 (16%)

Query: 7   VEDGEEVEQLNRLS--FARSPLIAPLGIPHCSASVGGARKSLPVNSASDFVS-FCDS-GS 62
           VEDGEE++Q   +   F +SP+ APL IP  + +    +K L    +S  VS  C S   
Sbjct: 68  VEDGEEIDQDYEILNLFKKSPIQAPLAIP--TYNRRPPQKHLSQGLSSGTVSDTCQSIAQ 125

Query: 63  LPDTDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSARSANENEP 122
           LPDT +L +R+EQ   ++GL  +S + A++LNN LD YLKRLI+ C+DL +++  N    
Sbjct: 126 LPDTCSLMKRLEQKLEIEGLK-ISTDAASLLNNALDVYLKRLIKPCLDLAASKLVN---- 180

Query: 123 TKLPVSKPQIQGKIMNGM--WPNNQSHVQQSPGGPAEPELEHRPQISISLHDFKVAMELN 180
                   +  G I  G+   P  +  VQ+S G P           S+S+ DF+ A+ELN
Sbjct: 181 --------KFSGPIQPGLNELPMRRC-VQKSIGSP-----------SVSISDFRTAVELN 220

Query: 181 PQQLGEDWPLQLEKLSMQSLE 201
           P  LGEDW L LEK+ + +LE
Sbjct: 221 PTILGEDWSLNLEKVCLHALE 241


>Glyma10g40470.1 
          Length = 354

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 116/208 (55%), Gaps = 32/208 (15%)

Query: 2   SKTPI-VEDGEEVEQLNRLSF--ARSPLIAPLGIPHCSASVGGARKSLPVNSAS-DFVSF 57
           S+ PI VE+GEEVEQ+       +RSP+ APLG+    +   G R    V+  S D+   
Sbjct: 172 SRPPISVEEGEEVEQMAGSPSIQSRSPVTAPLGV----SMHFGRRLHFNVSLCSKDYPET 227

Query: 58  CDS-GSLPDTDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSARS 116
           C S GSLPDT +LR R+EQ    +GL   +++  N+LNN LD YLKRLI S +DL  +R 
Sbjct: 228 CHSNGSLPDTRSLRSRLEQKLEKEGLTA-TVDSVNLLNNALDLYLKRLIESFMDLAGSRF 286

Query: 117 ANENEPTKLPVSKPQIQGKIMNGMWPNN--QSHVQQSPGGPAEPELEHRPQISISLHDFK 174
            NE+    L     Q+ G   N + P    Q+  + +               S S+ DF+
Sbjct: 287 GNEH----LRQQNRQL-GTSSNVLLPGRCMQTATRST---------------SASVLDFR 326

Query: 175 VAMELNPQQLGEDWPLQLEKLSMQSLEK 202
           +AMELNPQ LG DWP+QLEK+ +++ E+
Sbjct: 327 LAMELNPQVLGPDWPIQLEKICIRASEE 354


>Glyma17g17720.1 
          Length = 327

 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 107/198 (54%), Gaps = 30/198 (15%)

Query: 2   SKTPI-VEDGEEVEQLNRLS--FARSPLIAPLGIPHCSASVGGARKSLPVNSASDFVS-F 57
           S+ P+ VEDGEEV+Q   +   F +SP+ APL IP  + +     K L    +S  VS  
Sbjct: 155 SRLPLSVEDGEEVDQDYEILNLFKKSPIQAPLAIP--TYNRRPQPKYLSQGLSSGTVSDT 212

Query: 58  CDS-GSLPDTDTLRRRMEQIATVQGLGGVSMECANMLNNVLDSYLKRLIRSCVDLVSARS 116
           C S   LPDT +L +R+EQ   ++GL  +S + A++LNN LD YLKRLI+ C+DL +++S
Sbjct: 213 CQSIAQLPDTCSLTKRLEQKLEIEGLK-ISTDAASLLNNALDVYLKRLIKPCLDLAASKS 271

Query: 117 ANENEPTKLPVSKPQIQGKIMNGMWPNNQSHVQQSPGGPAEPELEHRPQISISLHDFKVA 176
            N            +  G I  G+         Q P   A          S+S+ DF+ A
Sbjct: 272 VN------------KFSGPIQPGLNELPLRRCVQKPIRSA----------SVSISDFRTA 309

Query: 177 MELNPQQLGEDWPLQLEK 194
           +ELNP  LGEDWPL LEK
Sbjct: 310 VELNPTILGEDWPLNLEK 327