Miyakogusa Predicted Gene

Lj0g3v0311949.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0311949.1 Non Chatacterized Hit- tr|K4CHC1|K4CHC1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,41.86,8e-19,PMD,Aminotransferase-like, plant mobile domain;
coiled-coil,NULL,CUFF.21044.1
         (239 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g11890.1                                                       234   5e-62
Glyma18g11860.1                                                        82   6e-16
Glyma08g42610.1                                                        77   2e-14
Glyma10g09670.1                                                        76   3e-14
Glyma08g42560.1                                                        67   1e-11
Glyma08g42550.1                                                        65   6e-11

>Glyma18g11890.1 
          Length = 577

 Score =  234 bits (598), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/296 (45%), Positives = 168/296 (56%), Gaps = 65/296 (21%)

Query: 1   MERFPALQRYPQTVEE-QVLRRWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPYNNSPS 59
           +ERFPALQ  P  +E+ Q+L    KW  VKM+K  NLK +LDS G  N F+W PY NSP+
Sbjct: 290 LERFPALQPLPDVIEQGQLLM--TKWHAVKMLKGDNLKLILDSVGAENGFIWHPYENSPA 347

Query: 60  LKLYNEKEMWECDNPNLDYELESFDRCLRACKLVGMGCVEQYLPHRVALQFGLDQDIPGM 119
           L+LYNE +MW CDNPN D ELESF RCLR  +LVGM C+EQYLP+RVA+QFG+DQDIPGM
Sbjct: 348 LQLYNENDMWVCDNPNFDDELESFARCLRVSELVGMECIEQYLPNRVAMQFGMDQDIPGM 407

Query: 120 VLDCNNDPW-------------------------------------KSEGSFGPPPGFTS 142
           +   N++PW                                     KS GS+GPPPGFTS
Sbjct: 408 LAHYNDNPWISYSQPVMDTNLYTALCACHQPNVTSRYYRWWKQSNPKSGGSYGPPPGFTS 467

Query: 143 KFGRDQAGDFDKKDQL-------------------GERRDNDDSKEAKMKSPLCDINGAI 183
           K    Q  DFD++ +L                   G R   D+  E K++   CD N   
Sbjct: 468 KINAKQEKDFDEEGKLSIIELSDSSNEVRCLASVEGARTVKDNGNEVKIEHSFCDRNDVN 527

Query: 184 DMEGEGEGARVGLGAKVVSELKATKLRISKLEKVIAELKAAKFGPKVESGAPKAKP 239
           D EGE    R+   A + S L++   RI KLE+VIA+LKAAKFG KV++   KA+P
Sbjct: 528 DKEGEDASHRI---ANIASNLES---RIWKLERVIAKLKAAKFGHKVQNIGVKAEP 577


>Glyma18g11860.1 
          Length = 572

 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 56/128 (43%), Positives = 73/128 (57%), Gaps = 14/128 (10%)

Query: 2   ERFPALQRYPQTV--EEQVLRRWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPY-NNSP 58
           ERF  LQ  P  +  E+ +L RW K   V  +K  N++  LDSA +   F WRPY   + 
Sbjct: 285 ERFMNLQPQPMLINQEDPMLFRWHK---VNTLKIDNVRLALDSAME--HFRWRPYVQYAG 339

Query: 59  SLKL-YNEKEMWECDNPNLDYE----LESFDRCLRACKLVGM-GCVEQYLPHRVALQFGL 112
             K+ Y E E     + NLD E    L SF  CLR   LVG+   +++YLPHRVA+QFG+
Sbjct: 340 KFKVFYPENETLVLIDTNLDKEPTGLLVSFVTCLRVSVLVGIQSTIKKYLPHRVAMQFGM 399

Query: 113 DQDIPGMV 120
           DQD+PG V
Sbjct: 400 DQDVPGRV 407


>Glyma08g42610.1 
          Length = 580

 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/126 (41%), Positives = 73/126 (57%), Gaps = 14/126 (11%)

Query: 2   ERFPALQRYPQTV--EEQVLRRWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPY-NNSP 58
           ERF  LQ  P+ +  E+ ++ RW K   VK +K  N++  L+SA +   F WRPY   + 
Sbjct: 258 ERFKNLQPQPRLINHEDPMMFRWHK---VKALKIDNVRLALESAME--HFCWRPYVQYAG 312

Query: 59  SLKL-YNEKEMWECDNPNLDYE----LESFDRCLRACKLVGM-GCVEQYLPHRVALQFGL 112
             K+ Y E E     + +LD E    L SF  CLR   LVG+   +++YLPHRVA+QFG+
Sbjct: 313 KFKVFYPENETLVLIDTDLDKEPTGLLVSFATCLRVSLLVGIQSTIKKYLPHRVAMQFGM 372

Query: 113 DQDIPG 118
           DQD+P 
Sbjct: 373 DQDVPS 378


>Glyma10g09670.1 
          Length = 548

 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/130 (41%), Positives = 73/130 (56%), Gaps = 16/130 (12%)

Query: 2   ERFPALQRYPQTV--EEQVLRRWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPY---NN 56
           ERF  LQ  P+ +  E+ VL RW K   VK ++  N++  ++SA D   F WRPY     
Sbjct: 292 ERFKNLQPQPKLINHEDPVLFRWHK---VKALEIDNVRLAVESAMD--HFRWRPYVQYAG 346

Query: 57  SPSLKLYN-EKEMWECDNPNLDYE----LESFDRCLRACKLVGMGC-VEQYLPHRVALQF 110
           +   K+Y  E E     + +LD E    L SF  CL+   LVG+   +E YLPHRVA+QF
Sbjct: 347 TGKFKVYYPENETLVILDTDLDKEPTGILASFVACLKVSLLVGIQSNIELYLPHRVAMQF 406

Query: 111 GLDQDIPGMV 120
           G+DQD+P  V
Sbjct: 407 GMDQDVPSCV 416


>Glyma08g42560.1 
          Length = 295

 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 26/47 (55%), Positives = 37/47 (78%)

Query: 81  ESFDRCLRACKLVGMGCVEQYLPHRVALQFGLDQDIPGMVLDCNNDP 127
           +SF  CLR  +LVG  C+E+Y P+RVA+QF +DQDIP M++ CN++P
Sbjct: 236 KSFAHCLRVLELVGTKCIERYSPNRVAMQFRMDQDIPSMLVHCNDNP 282


>Glyma08g42550.1 
          Length = 317

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 35/73 (47%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 1   MERFPALQ-RYPQTVEEQVLRRWAKWDGVKMVKDKNLKSVLDSAGDCNRFLWRPYNNSPS 59
           +ERFP L  R P  + +  L   AKW  VKM+K  + K +LDS    N F+WRPY NSP 
Sbjct: 182 LERFPLLHSRLPHGIRQGKLMV-AKWHKVKMLKHDSFKLILDSLRARNGFIWRPYKNSPP 240

Query: 60  LKLYNEKEMWECD 72
           L+LYNEK++  C 
Sbjct: 241 LELYNEKDIILCS 253