Miyakogusa Predicted Gene

Lj0g3v0279619.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0279619.1 Non Chatacterized Hit- tr|B9RET3|B9RET3_RICCO
5'->3' exoribonuclease, putative OS=Ricinus communis G,46.51,2e-16,
,CUFF.18604.1
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g37260.2                                                       142   8e-35
Glyma20g37260.1                                                       142   8e-35
Glyma19g43160.1                                                       142   8e-35
Glyma03g40500.1                                                       115   9e-27

>Glyma20g37260.2 
          Length = 931

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 8/127 (6%)

Query: 1   MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPRSSRLPNSGP 60
           + RP+Y     GGQNDR N + Q R  +QEQ +N K+ F ALTMEEG RPRSSRLPNS P
Sbjct: 809 ITRPKY-----GGQNDRQNLKIQDRLHNQEQFHNTKSEFVALTMEEGERPRSSRLPNSRP 863

Query: 61  I-NLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDKQT-KVYQVKKQEP 118
           + NL+PRF+QNM   +PPPKW+T+ PP N M++RHQEAA G   +DKQT KVYQVK ++P
Sbjct: 864 VTNLQPRFMQNMDPSIPPPKWMTRTPPMNGMHTRHQEAALGPATHDKQTKKVYQVKTRQP 923

Query: 119 QDTPDCG 125
            DTP+ G
Sbjct: 924 -DTPEYG 929


>Glyma20g37260.1 
          Length = 932

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 76/127 (59%), Positives = 94/127 (74%), Gaps = 8/127 (6%)

Query: 1   MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPRSSRLPNSGP 60
           + RP+Y     GGQNDR N + Q R  +QEQ +N K+ F ALTMEEG RPRSSRLPNS P
Sbjct: 810 ITRPKY-----GGQNDRQNLKIQDRLHNQEQFHNTKSEFVALTMEEGERPRSSRLPNSRP 864

Query: 61  I-NLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDKQT-KVYQVKKQEP 118
           + NL+PRF+QNM   +PPPKW+T+ PP N M++RHQEAA G   +DKQT KVYQVK ++P
Sbjct: 865 VTNLQPRFMQNMDPSIPPPKWMTRTPPMNGMHTRHQEAALGPATHDKQTKKVYQVKTRQP 924

Query: 119 QDTPDCG 125
            DTP+ G
Sbjct: 925 -DTPEYG 930


>Glyma19g43160.1 
          Length = 957

 Score =  142 bits (358), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 77/141 (54%), Positives = 92/141 (65%), Gaps = 16/141 (11%)

Query: 1   MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPR--------- 51
           + RPRYP +SNGG N++ NFR Q RSQH EQ YN + GF  +TMEEG RPR         
Sbjct: 817 ITRPRYPVSSNGGNNEKQNFRIQDRSQHHEQYYNGRTGFHTMTMEEGARPRPYAVPSPRT 876

Query: 52  ----SSRLPNSGPI-NLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDK 106
                SR PNSGP  N + +FVQNMG P+PPP WIT+AP  N +Y+ HQE A G   YDK
Sbjct: 877 QVVMLSRSPNSGPTTNGQHQFVQNMGPPIPPPNWITRAPDTNGIYAWHQETALGGA-YDK 935

Query: 107 Q-TKVYQVKKQEPQDTPDCGN 126
           Q  KVYQ K ++PQD P+ GN
Sbjct: 936 QHIKVYQAKTRQPQDMPEYGN 956


>Glyma03g40500.1 
          Length = 966

 Score =  115 bits (288), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 65/127 (51%), Positives = 76/127 (59%), Gaps = 16/127 (12%)

Query: 1   MARPRYPFTSNGGQNDRHNFRTQFRSQHQEQSYNVKAGFSALTMEEGVRPR--------- 51
           + RPRYP +SNGG ND+ NFR Q RS H +Q YN   GF  + MEEG R R         
Sbjct: 821 ITRPRYPVSSNGGHNDKQNFRIQDRSYHHDQYYNGTTGFYTMAMEEGARARPYAVPLPRT 880

Query: 52  ----SSRLPNSGP-INLEPRFVQNMGRPVPPPKWITKAPPANEMYSRHQEAASGAVPYDK 106
                SR PNSG   N + +FVQNMG P+PPP WIT+ P  N +Y+ HQE A G   YDK
Sbjct: 881 PAVTLSRPPNSGSTTNGQHQFVQNMGPPIPPPNWITRVPDTNGIYAGHQETALGGT-YDK 939

Query: 107 Q-TKVYQ 112
           Q  KVYQ
Sbjct: 940 QNMKVYQ 946