Miyakogusa Predicted Gene

Lj0g3v0231269.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0231269.1 tr|Q8S9I4|Q8S9I4_ARATH AT4g02720/T10P11_1
OS=Arabidopsis thaliana GN=At4g02720 PE=2 SV=1,58.14,2e-18,seg,NULL;
NF-KAPPA B ACTIVATING PROTEIN,Protein of unknown function DUF926;
SynMuv_product,Protein o,CUFF.15245.1
         (463 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g03290.1                                                       209   4e-54
Glyma02g16550.1                                                       206   5e-53
Glyma18g06440.1                                                        49   9e-06

>Glyma10g03290.1 
          Length = 455

 Score =  209 bits (533), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 111/169 (65%), Positives = 125/169 (73%), Gaps = 7/169 (4%)

Query: 1   MGRPSSTIEIPNDRHR---RRTPDSDISDDYRPRRRSPNYDSYDXX---XXXXXXXXXXX 54
           MGRPSSTIEIP++R+R   RRTPD D+SDDYR RRRSP+YDSYD                
Sbjct: 1   MGRPSSTIEIPHERYRHNDRRTPDPDVSDDYR-RRRSPSYDSYDRHPERRRRRSVSPEHR 59

Query: 55  XXXXTNGNTNDNALPKKFGRRNGSYLDRDGKDWQRSESESDEELKGLSFEEYRRLKRQKM 114
               TNG  NDNALPKKFGRRNG+YLDRD  DWQRS+SESDEELKGL+FEEYRRLKRQKM
Sbjct: 60  NPRHTNGTHNDNALPKKFGRRNGAYLDRDRGDWQRSDSESDEELKGLNFEEYRRLKRQKM 119

Query: 115 RKALKHCIWNVTPSPPRNENEDAEDDFKAEEVPEKFGDGGDLKIEKEVK 163
           RK+LKHCIWNVTPSPPR ENED ED  K +E+ ++    G +  EK  K
Sbjct: 120 RKSLKHCIWNVTPSPPRRENEDLEDYSKPDEISDRNDGAGKIDTEKRRK 168



 Score =  206 bits (523), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 108/138 (78%), Positives = 118/138 (85%), Gaps = 6/138 (4%)

Query: 331 AKAKPESESEGL----EENDSGDAKGKAVVDEVQVTDIINAEG-KLKESFDSQEIPDLDN 385
            K   E+ES G     EEN SGDAK KA+VDEV++T+I NAE  KLKE F+SQ+ P LDN
Sbjct: 258 TKGSSETESAGSGSEEEENGSGDAKSKAMVDEVKMTEI-NAEAIKLKELFESQKKPALDN 316

Query: 386 EPVVGPMPLPKPEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSADEIQKFESLG 445
           EP VGPMPLP+ EGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSA+EIQKFE+LG
Sbjct: 317 EPAVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFENLG 376

Query: 446 YVMSGSRHQRMNAIRIRK 463
           YVMSGSRHQRMNAIRIRK
Sbjct: 377 YVMSGSRHQRMNAIRIRK 394


>Glyma02g16550.1 
          Length = 498

 Score =  206 bits (524), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 110/165 (66%), Positives = 125/165 (75%), Gaps = 9/165 (5%)

Query: 1   MGRPSSTIEIPNDRHR---RRTPDSDISDDYRPRRRSPNYDSYDXXXXXXXXXXXXXXXX 57
           MGRPSSTIEIP++RHR   RRTPDSDISDDYR RRRSP+YDSYD                
Sbjct: 1   MGRPSSTIEIPHERHRHNGRRTPDSDISDDYR-RRRSPSYDSYDRHTERHRRCSESPEHR 59

Query: 58  X---TNGNTNDNALPKKFGRRNGSYLDRDGKDWQRSESESDEELKGLSFEEYRRLKRQKM 114
               TNG  NDN LPKKFGRRNG+YLDRD  DWQRS+SESDEELKGL++EE+RRLKRQKM
Sbjct: 60  SPRHTNGTHNDNTLPKKFGRRNGAYLDRDRGDWQRSDSESDEELKGLNYEEFRRLKRQKM 119

Query: 115 RKALKHCIWNVTPSPPRNENEDAEDDFKAEEVPEKFGDGGDLKIE 159
           RK+LKHCIWNVTPSPPR +NED ED  K +E+ ++  D G  KI+
Sbjct: 120 RKSLKHCIWNVTPSPPRRDNEDPEDYSKPDEISDR--DDGAGKID 162



 Score =  202 bits (513), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/135 (80%), Positives = 115/135 (85%), Gaps = 7/135 (5%)

Query: 335 PESESEG--LEEND---SGDAKGKAVVDEVQVTDIINAEG-KLKESFDSQEIPDLDNEPV 388
           PE+E EG  LEE +   SGDAK K  VDEV  T+I NAE  KLKE F+SQ+ P LDNEP 
Sbjct: 304 PETEGEGSDLEEENGSGSGDAKSKTTVDEVMKTEI-NAEAIKLKELFESQKKPALDNEPA 362

Query: 389 VGPMPLPKPEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSADEIQKFESLGYVM 448
           VGPMPLP+ EGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSA+EIQKFESLGYVM
Sbjct: 363 VGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFESLGYVM 422

Query: 449 SGSRHQRMNAIRIRK 463
           SGSRHQRMNAIRIRK
Sbjct: 423 SGSRHQRMNAIRIRK 437


>Glyma18g06440.1 
          Length = 169

 Score = 49.3 bits (116), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 23/49 (46%), Positives = 33/49 (67%)

Query: 98  LKGLSFEEYRRLKRQKMRKALKHCIWNVTPSPPRNENEDAEDDFKAEEV 146
           ++G   +   + + QKMRK+LKH IW V P+PPR EN+D ED  K +E+
Sbjct: 30  VEGFELQGIPKAQVQKMRKSLKHYIWKVKPNPPRRENDDLEDYNKPDEI 78