Miyakogusa Predicted Gene

Lj0g3v0230749.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0230749.3 tr|D3BRB4|D3BRB4_POLPA RING zinc
finger-containing protein OS=Polysphondylium pallidum GN=vps11
PE=4,34.15,0.000000000005,seg,NULL; VACUOLAR MEMBRANE PROTEIN PEP5,
11,NULL; VACUOLAR MEMBRANE PROTEIN RELATED,NULL; no
descri,CUFF.15081.3
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g13120.1                                                       288   2e-78
Glyma03g24990.1                                                       283   6e-77

>Glyma07g13120.1 
          Length = 966

 Score =  288 bits (736), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 138/165 (83%), Positives = 145/165 (87%), Gaps = 3/165 (1%)

Query: 1   MYQWRKFEFFEEKYASKCVIPEXXXXXXXXXXXKNEGKKIDCCSSGRGKVVTGFDDGTVC 60
           MYQWRKFEFFEEKY +KC +PE           +   +KI+CCSSGRGKVVTGFDDG VC
Sbjct: 1   MYQWRKFEFFEEKYGAKCAVPEADEDDSGVIAAE---RKIECCSSGRGKVVTGFDDGVVC 57

Query: 61  LFDRGLKFNYAFQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQNSALCLKVFDLDKMQSE 120
            FDRGLKFNYAFQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQ +ALCLKVFDLDKMQSE
Sbjct: 58  FFDRGLKFNYAFQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQQTALCLKVFDLDKMQSE 117

Query: 121 SSSTASPDCVGILRIFTNQFPEAQITSFLVLEEVPPILLIAIGLD 165
           SSST SPDCVGILRIFTNQFPEA+ITSFLVLEEVPPILLIAIGLD
Sbjct: 118 SSSTTSPDCVGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLD 162


>Glyma03g24990.1 
          Length = 965

 Score =  283 bits (724), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 136/165 (82%), Positives = 143/165 (86%), Gaps = 4/165 (2%)

Query: 1   MYQWRKFEFFEEKYASKCVIPEXXXXXXXXXXXKNEGKKIDCCSSGRGKVVTGFDDGTVC 60
           MYQWRKFEFFEEKY +KC +PE           +    KI+CCSSGRGK+VTGFDDG VC
Sbjct: 1   MYQWRKFEFFEEKYGAKCAVPENDEDDGVVAAER----KIECCSSGRGKLVTGFDDGVVC 56

Query: 61  LFDRGLKFNYAFQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQNSALCLKVFDLDKMQSE 120
            FDRGLKFNY+FQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQ SALCLKVFDLDKMQ E
Sbjct: 57  FFDRGLKFNYSFQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQQSALCLKVFDLDKMQPE 116

Query: 121 SSSTASPDCVGILRIFTNQFPEAQITSFLVLEEVPPILLIAIGLD 165
           SSST SPDCVGILRIFTNQFPEA+ITSFLVLEEVPPILLIAIGLD
Sbjct: 117 SSSTTSPDCVGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLD 161