Miyakogusa Predicted Gene
- Lj0g3v0209609.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0209609.1 tr|Q52KA1|Q52KA1_ARATH At4g39795 OS=Arabidopsis
thaliana GN=At4g39795 PE=2 SV=1,41.84,2e-19,DUF581,Protein of unknown
function DUF581; seg,NULL,CUFF.13444.1
(156 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma14g34330.1 140 6e-34
Glyma06g11090.1 131 4e-31
Glyma13g02050.1 127 4e-30
Glyma04g11460.1 112 1e-25
Glyma18g02220.1 75 2e-14
Glyma03g25200.1 55 3e-08
Glyma07g13450.1 54 6e-08
Glyma16g01550.1 54 1e-07
Glyma17g05520.1 53 1e-07
Glyma13g17220.1 53 1e-07
Glyma01g41170.1 52 2e-07
Glyma05g05800.1 52 2e-07
Glyma17g16130.1 52 3e-07
Glyma09g04810.1 52 3e-07
Glyma11g04250.1 51 5e-07
Glyma17g03090.1 51 5e-07
Glyma07g37560.1 50 7e-07
Glyma09g08300.1 50 9e-07
Glyma07g05010.1 50 1e-06
>Glyma14g34330.1
Length = 170
Score = 140 bits (353), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 91/156 (58%), Gaps = 5/156 (3%)
Query: 1 MLLGKRPRPPMKRTTSMSEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTKVLAPVP 60
MLLGKRPRPPMKRTTSMSE+ T++LA
Sbjct: 20 MLLGKRPRPPMKRTTSMSEMTLDLNTAAAADAAANQQRSGVGPGAAADQT--TRMLAT-- 75
Query: 61 PRNHRRHSSDFTGTPDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDERKE 120
P+ RRHSSDF TP F VPG DIYMYRGD+AFCSLECRQQQM QDERKE
Sbjct: 76 PKILRRHSSDFGDTPPFLRACSLCKRCLVPGHDIYMYRGDNAFCSLECRQQQMNQDERKE 135
Query: 121 KLLVASAKKQVVAAPASSGSQVTNTASKGETTVAAL 156
K ++AS KK+VVA P S TA+KGETTV AL
Sbjct: 136 KFVMAS-KKKVVATPPSGSQVAVATATKGETTVVAL 170
>Glyma06g11090.1
Length = 154
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 93/158 (58%), Gaps = 9/158 (5%)
Query: 1 MLLGKRPRPP-MKRTTSMSEIXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXQTKVLAP 58
MLLGKRPRPP MKRTTSMSEI Q +V A
Sbjct: 1 MLLGKRPRPPIMKRTTSMSEITFDLNTSLDDDPNNSVKGPGGDGPPVGLNGLDQNRVWAM 60
Query: 59 VPPRNH--RRHSSDFTGTPDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQD 116
V PRNH R++S D TP F VPGRDI+MY+GDSAFCS ECR+QQMK D
Sbjct: 61 VSPRNHHRRQYSED---TPGFLRVCFLCKRRLVPGRDIFMYKGDSAFCSSECREQQMKHD 117
Query: 117 ERKEKLLVASAKKQVVAAPASSGSQVTNTASKGETTVA 154
ERK+K VAS+KKQV A P +SGSQVT T +KGET VA
Sbjct: 118 ERKDKCRVASSKKQVAAKP-NSGSQVT-TNTKGETVVA 153
>Glyma13g02050.1
Length = 143
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/149 (51%), Positives = 85/149 (57%), Gaps = 6/149 (4%)
Query: 1 MLLGKRPRPPMKRTTSMSEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTKVLAPVP 60
MLLGKRPRPPMKRTTSMSE+ T++LA
Sbjct: 1 MLLGKRPRPPMKRTTSMSEMTLDLNTAADAAAAADQQRSGVGPSAAADQT--TRMLAS-- 56
Query: 61 PRNHRRHSSDFTGTPDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDERKE 120
P+ RRHSS F F VPGRDIYMYRGDSAFCSLECRQQQ+ QDERKE
Sbjct: 57 PKILRRHSSYFGDARHFLRACSLCKRPLVPGRDIYMYRGDSAFCSLECRQQQINQDERKE 116
Query: 121 KLLVASAKKQVVAAPASSGSQVTNTASKG 149
K ++AS KK V AP SGSQV TA+KG
Sbjct: 117 KFVMASKKK--VVAPPPSGSQVVATATKG 143
>Glyma04g11460.1
Length = 136
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 84/155 (54%), Gaps = 21/155 (13%)
Query: 1 MLLGKRPRPP-MKRTTSMSEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTKVLAPV 59
MLLGKRPRPP MKRTTSMSEI Q +V A V
Sbjct: 1 MLLGKRPRPPIMKRTTSMSEITFDLNTTLDDDPNNPVKGPGGN---------QNRVWAMV 51
Query: 60 PPRNHRRHSSDFTGTPDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDERK 119
PRNH + TPDF VP RDI+MY+GDSAFCS ECR+Q MKQDERK
Sbjct: 52 SPRNHSEDT-----TPDFLRVCFLCKRRLVPARDIFMYKGDSAFCSSECREQLMKQDERK 106
Query: 120 EKLLVASAKKQVVAAPASSGSQVTNTASKGETTVA 154
+K V S KKQV P +SGSQV +KGET VA
Sbjct: 107 DKYRVGS-KKQVAEKP-NSGSQV----NKGETVVA 135
>Glyma18g02220.1
Length = 204
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 38/46 (82%)
Query: 90 PGRDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQVVAAP 135
PGRDIYMYRGD+AFCSLECR++QMKQD+RKEK S K+ A+P
Sbjct: 149 PGRDIYMYRGDAAFCSLECREKQMKQDQRKEKWKAGSNKEHHRASP 194
>Glyma03g25200.1
Length = 135
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%)
Query: 68 SSDFTGTPDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASA 127
S D + P F RDI+MYRG++ FCS ECRQ+Q++ DE KEK S+
Sbjct: 49 SEDHSEEPHFLQACFLCRKPLGQNRDIFMYRGNTPFCSKECRQEQIEIDESKEKSWKLSS 108
Query: 128 KKQVVAAPASSGSQVTNTASKGETTVA 154
K+ V + + S G VA
Sbjct: 109 KRGVRQSETNQNSTPNKAVRTGTVAVA 135
>Glyma07g13450.1
Length = 115
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 91 GRDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQVVAAPASSGSQVTNTASKGE 150
RDI+MYRG++ FCS ECRQ+Q++ DE KEK S+K+ V + + S G
Sbjct: 52 NRDIFMYRGNTPFCSKECRQEQIEIDEAKEKSWKLSSKRGVRQSETNQNSTPNKAVRTGT 111
Query: 151 TTVA 154
VA
Sbjct: 112 VAVA 115
>Glyma16g01550.1
Length = 199
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 90 PGRDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQVVAAPASSGSQ 141
P +DIYMYRGD FCS+ECR +Q+ D+ +E + ++ K++VAA S+
Sbjct: 130 PDKDIYMYRGDQGFCSVECRNRQIVLDDMRE---LENSTKKIVAAYRQCSSE 178
>Glyma17g05520.1
Length = 238
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 91 GRDIYMYRGDSAFCSLECRQQQMKQDERKEK 121
G+DIYMYRG+ AFCS ECR Q+ DERKE+
Sbjct: 179 GKDIYMYRGEKAFCSPECRSSQIMMDERKER 209
>Glyma13g17220.1
Length = 279
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 91 GRDIYMYRGDSAFCSLECRQQQMKQDERKEK 121
G+DIYMYRG+ AFCS ECR Q+ DERKE+
Sbjct: 183 GKDIYMYRGEKAFCSPECRSSQITMDERKER 213
>Glyma01g41170.1
Length = 156
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 92 RDIYMYRGDSAFCSLECRQQQMKQDERKEK 121
RDI+MYRGD+ FCS ECRQ+Q+++DE KEK
Sbjct: 89 RDIFMYRGDTPFCSEECRQEQIERDEAKEK 118
>Glyma05g05800.1
Length = 171
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 91 GRDIYMYRGDSAFCSLECRQQQMKQDERKEK 121
RDI+MYRGD+ FCS ECRQ+Q++ DE KEK
Sbjct: 99 NRDIFMYRGDTPFCSEECRQEQIEIDEAKEK 129
>Glyma17g16130.1
Length = 178
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 91 GRDIYMYRGDSAFCSLECRQQQMKQDERKEK 121
RDI+MYRGD+ FCS ECRQ+Q++ DE KEK
Sbjct: 105 NRDIFMYRGDTPFCSEECRQEQIEIDEAKEK 135
>Glyma09g04810.1
Length = 125
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 89 VPGRDIYMYRGDSAFCSLECRQQQMKQDERK 119
+PG+DIYMY+GD AFCS+ECR +Q+ DE +
Sbjct: 76 LPGKDIYMYKGDRAFCSVECRCKQIFMDEEE 106
>Glyma11g04250.1
Length = 159
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 93 DIYMYRGDSAFCSLECRQQQMKQDERKEK 121
DI+MY+GD+ FCS ECRQ+QM++DE KEK
Sbjct: 93 DIFMYKGDTPFCSEECRQEQMERDEAKEK 121
>Glyma17g03090.1
Length = 133
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 75 PDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDE----RKEKLLVASAK 128
P F +PG+DIYMY+GD AFCS++CR +Q+ DE +KEK +A+ +
Sbjct: 49 PTFLDQCFLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFSDEEEAIQKEKCSLAAMR 106
>Glyma07g37560.1
Length = 135
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 75 PDFXXXXXXXXXXXVPGRDIYMYRGDSAFCSLECRQQQMKQDE----RKEKLLVASAK 128
P F +PG+DIYMY+GD AFCS++CR +Q+ DE +KEK +A+ +
Sbjct: 51 PTFLDQCFLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFTDEEEAIQKEKCSLAAMR 108
>Glyma09g08300.1
Length = 253
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 89 VPGRDIYMYRGDSAFCSLECRQQQMK-QDERKEKLLV-ASAKKQVVAAPASSGSQVTNTA 146
+ G+DIYMYRG+ AFCS ECR +Q+ DERKE+ AS ++ ++P ++ Q+ +T
Sbjct: 190 LDGKDIYMYRGEKAFCSNECRSRQISMDDERKERCRSEASRSVELSSSPYTARDQMFSTG 249
>Glyma07g05010.1
Length = 156
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 90 PGRDIYMYRGDSAFCSLECRQQQMKQDERKEKLLVASAKKQVVAAPASSGSQ 141
P +DIYMY D FCS+ECR +Q+ DE +E + S+ KQ+VAA S+
Sbjct: 87 PDKDIYMYSRDQGFCSVECRNRQIVLDEMRE---LESSTKQMVAAYRQCSSE 135