Miyakogusa Predicted Gene

Lj0g3v0206449.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0206449.2 Non Chatacterized Hit- tr|B6VCR9|B6VCR9_TRIMO
Putative expressed protein (Fragment) OS=Triticum
mono,64.94,3e-18,coiled-coil,NULL; seg,NULL,CUFF.13214.2
         (461 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g25700.1                                                       497   e-140
Glyma20g20050.1                                                       155   8e-38
Glyma10g25690.1                                                       134   2e-31
Glyma20g20040.1                                                       124   2e-28

>Glyma10g25700.1 
          Length = 292

 Score =  497 bits (1279), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 251/292 (85%), Positives = 268/292 (91%), Gaps = 2/292 (0%)

Query: 172 MEVLQEDIKTHLDQFESIRSEYANAQLECNAADERAKLLASEVIGLEEKALRLRSSELKL 231
           ME L EDIK  L + E+I+SEY NAQLECNAADERAKLLASEVIGLEEKALRLRSSELKL
Sbjct: 1   MENLHEDIKARLVELEAIKSEYTNAQLECNAADERAKLLASEVIGLEEKALRLRSSELKL 60

Query: 232 EKQLENAQAELSSYRKKMSTLDKERRDLQSTIDALQEEKKVLLSKLRKASGIGKSIESQT 291
           EKQLENA+ E+SSYRKKMS+LDK+R DLQSTI+ALQEEKK+LLSKLRKASGIGKSIE+QT
Sbjct: 61  EKQLENAKEEISSYRKKMSSLDKDRHDLQSTIEALQEEKKMLLSKLRKASGIGKSIENQT 120

Query: 292 SKRDVSTSTEDIASEDPALNTSGSGINDNAEPSSSL--VAETRHSSFGVSPVNIPHDQMR 349
           SKRDVSTSTED+ASEDPA N+S   INDNA  +SSL  V ETRHSSFGVSPVNIPHDQMR
Sbjct: 121 SKRDVSTSTEDLASEDPASNSSNPEINDNAAEASSLSSVTETRHSSFGVSPVNIPHDQMR 180

Query: 350 MIENINALISELASEKEELVKALASESSECSRMKEINRELSRKLEVQTQRLELLTAQNMV 409
           MIENINALISELA EKEEL+KAL SESSECSRMKEIN ELSRKLEVQTQRLELLTAQ+MV
Sbjct: 181 MIENINALISELALEKEELIKALTSESSECSRMKEINMELSRKLEVQTQRLELLTAQSMV 240

Query: 410 TENISAKEPDSRVMYENTPYADEGDEVVERVLGWIMKLFPGGPSKRRTSKLL 461
            ENISAK+PDSR MYENT YADEGDEVVERVLGWIMKLFPGGPS+RRTSKLL
Sbjct: 241 NENISAKQPDSRAMYENTSYADEGDEVVERVLGWIMKLFPGGPSRRRTSKLL 292


>Glyma20g20050.1 
          Length = 80

 Score =  155 bits (393), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 72/80 (90%), Positives = 77/80 (96%)

Query: 382 MKEINRELSRKLEVQTQRLELLTAQNMVTENISAKEPDSRVMYENTPYADEGDEVVERVL 441
           MKEIN+ELSRKLEVQTQRLELLTAQ+MV EN+SAK+PDSR MYENTPYADEGDEVVERVL
Sbjct: 1   MKEINKELSRKLEVQTQRLELLTAQSMVNENVSAKQPDSRAMYENTPYADEGDEVVERVL 60

Query: 442 GWIMKLFPGGPSKRRTSKLL 461
           GWIMKLFPGG S+RRTSKLL
Sbjct: 61  GWIMKLFPGGTSRRRTSKLL 80


>Glyma10g25690.1 
          Length = 244

 Score =  134 bits (337), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/115 (64%), Positives = 87/115 (75%), Gaps = 3/115 (2%)

Query: 12  FLDSLNVTKPSSGSPFPQPLQDSSMYNNLESRSNYLPGSNYFHKPSEETKIVGHLSDLTT 71
           FLDSLNVT+PS GSPF Q  QDS M N LES SN + GS YFHKPSEETKI+   S+ TT
Sbjct: 115 FLDSLNVTRPSLGSPFHQSEQDSLMSNYLESSSNDISGSAYFHKPSEETKIMPLFSNFTT 174

Query: 72  S---SPFEHLTDPSVLNSNSQDTLMTNARENGMEKKHDYYSPSQNEDFAALEQHI 123
           +   S  E LT PSV+++++Q  L+T+ RE+GMEKKHDYYS SQNEDF ALEQ I
Sbjct: 175 ANVHSSLEPLTTPSVVDNDNQGALITSTRESGMEKKHDYYSSSQNEDFTALEQVI 229


>Glyma20g20040.1 
          Length = 188

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 81/109 (74%), Gaps = 3/109 (2%)

Query: 18  VTKPSSGSPFPQPLQDSSMYNNLESRSNYLPGSNYFHKPSEETKIVGHLSDLTTS---SP 74
           +  PS GSPF Q  QDSSM N+LES SN + GS YFHKPSEETK +   S+ TT+   S 
Sbjct: 65  IHSPSLGSPFHQSEQDSSMSNHLESSSNGISGSTYFHKPSEETKSMPLFSNFTTANVHSS 124

Query: 75  FEHLTDPSVLNSNSQDTLMTNARENGMEKKHDYYSPSQNEDFAALEQHI 123
            E LT PSV+++++Q  LMT+ RENGMEK+HDYYS SQNEDF+ALEQ I
Sbjct: 125 LEQLTTPSVVDNDNQGALMTSTRENGMEKQHDYYSSSQNEDFSALEQVI 173