Miyakogusa Predicted Gene

Lj0g3v0201039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0201039.1 Non Chatacterized Hit- tr|I1IB51|I1IB51_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,61.62,6e-17,seg,NULL,CUFF.12766.1
         (99 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g18760.1                                                       132   1e-31
Glyma04g36170.1                                                       127   2e-30

>Glyma06g18760.1 
          Length = 99

 Score =  132 bits (331), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/66 (93%), Positives = 65/66 (98%)

Query: 1  MLQFPAFMTQYPMSTRTIPTSFLLPSQWPQPQNEEFLLAMEESDFEEKCNEIRKMNSNLI 60
          MLQFPA+MTQYP+STRTIPTSFLLPSQWPQPQNEE LLAMEESDFEEKCNEIRKMNSNLI
Sbjct: 1  MLQFPAYMTQYPLSTRTIPTSFLLPSQWPQPQNEELLLAMEESDFEEKCNEIRKMNSNLI 60

Query: 61 MIGKTT 66
          +IGKTT
Sbjct: 61 VIGKTT 66


>Glyma04g36170.1 
          Length = 99

 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/66 (90%), Positives = 64/66 (96%)

Query: 1  MLQFPAFMTQYPMSTRTIPTSFLLPSQWPQPQNEEFLLAMEESDFEEKCNEIRKMNSNLI 60
          MLQFPA+MTQYP+ST TIPTSFLLP+QWPQPQNEE LLAMEESDFEEKCNEIRKMNSNLI
Sbjct: 1  MLQFPAYMTQYPLSTMTIPTSFLLPAQWPQPQNEELLLAMEESDFEEKCNEIRKMNSNLI 60

Query: 61 MIGKTT 66
          +IGKTT
Sbjct: 61 VIGKTT 66