Miyakogusa Predicted Gene

Lj0g3v0182029.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0182029.1 Non Chatacterized Hit- tr|H3GQI8|H3GQI8_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,29.31,1e-18,DUF2348,Uncharacterised protein family UPF0405;
Hap2_elong,Histone acetylation protein 2; no descrip,CUFF.11584.1
         (254 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45450.1                                                       425   e-119

>Glyma08g45450.1 
          Length = 260

 Score =  425 bits (1093), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/262 (81%), Positives = 230/262 (87%), Gaps = 10/262 (3%)

Query: 1   MEQHRDSNLLDEALGLHNNNNS---LCGRFVLVEDCVDTSAAFVLHHIIKRSLSSHP--- 54
           MEQ ++ NLLDEALGL+NNN     LCGRFVLVEDCVDTSAAFVLH I+KRS SSHP   
Sbjct: 1   MEQ-KNWNLLDEALGLNNNNAKPWPLCGRFVLVEDCVDTSAAFVLHQILKRSFSSHPSSA 59

Query: 55  VVFLAFSHPFSHYDRILRKLGCNLAAQRDNNRFFFIDMLMLQCPDEGKLNHDGFAAVFEK 114
           VVFLAFSHPFSHYDR+LRKLGCNLAAQRDN R FF+DMLMLQCPDEGK NHDG A+VFE+
Sbjct: 60  VVFLAFSHPFSHYDRVLRKLGCNLAAQRDNGRLFFLDMLMLQCPDEGKANHDGLASVFEQ 119

Query: 115 IERVVKALHQDNMKFASIMIDDISFLEVAANGSSNDVLDFLHYCHTLTS--EYGCAFIAL 172
           IERV+ ALHQD  KF SIMIDDISFLEVAANGSSNDVL+ +HYCHTLTS  EYGCAFIAL
Sbjct: 120 IERVITALHQDK-KFISIMIDDISFLEVAANGSSNDVLNLVHYCHTLTSDSEYGCAFIAL 178

Query: 173 DHKDIYLNEESPAIILEMEYLADVLVKAEPLATGLAKDVHGQLMVLHKETQHQHGSSPFK 232
           DHKDIYLN +  A++LEME+LAD+LVKAEPLATGLAKDVHGQLMVL KETQH+HG S  K
Sbjct: 179 DHKDIYLNGDRTAVMLEMEFLADILVKAEPLATGLAKDVHGQLMVLDKETQHRHGVSTVK 238

Query: 233 IHNFHFKIKENSIECFYPGTKI 254
            HNFHFKIKEN IECFYPGTKI
Sbjct: 239 THNFHFKIKENGIECFYPGTKI 260