Miyakogusa Predicted Gene

Lj0g3v0172019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0172019.1 Non Chatacterized Hit- tr|A5BL14|A5BL14_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,38.5,3e-19,seg,NULL,CUFF.10801.1
         (185 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g33850.1                                                       162   3e-40

>Glyma05g33850.1 
          Length = 357

 Score =  162 bits (409), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/194 (52%), Positives = 113/194 (58%), Gaps = 21/194 (10%)

Query: 3   EVEQTKNWAPSTNCSTHAEESVPTQRAAKAVVAAECRLGGWLQFDEEESQQRRNFLERND 62
           EV+QTKNWAPSTNCST AEESV  QRAAKA +A ECR  GWLQFDE E Q RRNF+ERN 
Sbjct: 174 EVDQTKNWAPSTNCSTLAEESVSIQRAAKAAIA-ECRTDGWLQFDEGELQHRRNFMERNA 232

Query: 63  TWHMMHQLTCXXXXXXXXXLIKXXXXXXXXXXXXXXXXXXXXXVRNYLIKTHDLTFFISP 122
           TWHMM QL+C         LI                      +   LIKTHDL+FF SP
Sbjct: 233 TWHMM-QLSCPPPPTVSPHLIN-TSPITSTTSMATATTVTARLMDPKLIKTHDLSFFTSP 290

Query: 123 QSEE----------HDNCVVESQTLQLFPLRSTXXXXXXXXXXIN-DKETEISASALNSN 171
             E            D+  VESQTLQLFP R+           IN  KETE+S SA+N+ 
Sbjct: 291 NRENGIIHLSSISTQDDNSVESQTLQLFPTRNA----DRSSDNINQQKETEVSVSAMNA- 345

Query: 172 LTPSQYFEFLPLKN 185
             PSQ+FEFLPLKN
Sbjct: 346 --PSQFFEFLPLKN 357