Miyakogusa Predicted Gene

Lj0g3v0160179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0160179.1 tr|D7BE34|D7BE34_MEISD Sugar isomerase (SIS)
OS=Meiothermus silvanus (strain ATCC 700542 / DSM 9946
,43.2,1e-18,seg,NULL; SIS domain,NULL; no description,NULL,CUFF.9939.1
         (142 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g29640.1                                                       187   2e-48
Glyma10g38200.1                                                       187   3e-48

>Glyma20g29640.1 
          Length = 204

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/136 (72%), Positives = 105/136 (77%), Gaps = 15/136 (11%)

Query: 1   MASDSNTQEGVASMATQICTQIATIFSKPTHPYPSPLDLLVTELTTVASQNNRVFLYGVG 60
           MA +S +Q   ASM TQICTQIA+IFSKPTHPYP+PLDLLVTELT+VASQ   VFLYGVG
Sbjct: 1   MACNSISQ--AASMGTQICTQIASIFSKPTHPYPAPLDLLVTELTSVASQKGNVFLYGVG 58

Query: 61  REGLMLKAFCMRLAHLGLSAHLVFDMTTPPIAAGDLLIASAGPGGFAPVDA--------- 111
           REGLMLKA CMRL HLGLSAH VFDMTTPPIAAGDLLIASAGPGGF+ VDA         
Sbjct: 59  REGLMLKALCMRLFHLGLSAHFVFDMTTPPIAAGDLLIASAGPGGFSTVDALCAVARSNG 118

Query: 112 ----TLPAQPKWGRWV 123
                L AQP+ G  V
Sbjct: 119 GRVLLLTAQPETGSCV 134


>Glyma10g38200.1 
          Length = 205

 Score =  187 bits (475), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 98/136 (72%), Positives = 105/136 (77%), Gaps = 15/136 (11%)

Query: 1   MASDSNTQEGVASMATQICTQIATIFSKPTHPYPSPLDLLVTELTTVASQNNRVFLYGVG 60
           MAS+S +Q   ASMAT+ICTQIA+IFSKPTHPYP PLDLLVTEL +VASQN RVFLYGVG
Sbjct: 1   MASNSISQ--AASMATEICTQIASIFSKPTHPYPPPLDLLVTELASVASQNGRVFLYGVG 58

Query: 61  REGLMLKAFCMRLAHLGLSAHLVFDMTTPPIAAGDLLIASAGPGGFAPVDA--------- 111
           REGLMLKA CMRL HLGLSAH VFDMTTPPI A DLLIASAGPGGF+ VDA         
Sbjct: 59  REGLMLKALCMRLFHLGLSAHFVFDMTTPPIDAADLLIASAGPGGFSTVDALCAVARSNG 118

Query: 112 ----TLPAQPKWGRWV 123
                L AQP+ G  V
Sbjct: 119 GRVLLLTAQPETGSCV 134