Miyakogusa Predicted Gene

Lj0g3v0158249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0158249.1 Non Chatacterized Hit- tr|D8RUG2|D8RUG2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,51.85,5e-19,seg,NULL,CUFF.9931.1
         (130 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g07340.1                                                       164   2e-41
Glyma04g07240.1                                                       160   4e-40
Glyma04g07240.2                                                       114   2e-26
Glyma07g03600.1                                                        75   1e-14
Glyma08g22490.1                                                        75   2e-14

>Glyma06g07340.1 
          Length = 228

 Score =  164 bits (415), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 78/92 (84%), Positives = 85/92 (92%)

Query: 31  IAARIYFLLILFQIPLFRVTCRSGVCTNPLHVTSSQLIASEIFPVPVVKGLLYPGAVVHG 90
           IAARI+FLLI+FQIPLFRVTCRSG+CT PLHVTSSQLIASEIFPV VVKGLLYPGA V+G
Sbjct: 36  IAARIFFLLIIFQIPLFRVTCRSGMCTTPLHVTSSQLIASEIFPVVVVKGLLYPGAAVNG 95

Query: 91  LIHNMSVPSWGNLLETYNLTAVKNASAVTDLH 122
           LIHNM+VPSW NLL+ YNLT+VK ASAVTDL 
Sbjct: 96  LIHNMTVPSWDNLLDLYNLTSVKEASAVTDLQ 127


>Glyma04g07240.1 
          Length = 209

 Score =  160 bits (404), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 76/92 (82%), Positives = 84/92 (91%)

Query: 31  IAARIYFLLILFQIPLFRVTCRSGVCTNPLHVTSSQLIASEIFPVPVVKGLLYPGAVVHG 90
           IA+RI+FLLI+FQIPLFRVTCRSG+CT PLHVTSSQLIASEIFPV VVKGLLYPGA V+G
Sbjct: 17  IASRIFFLLIIFQIPLFRVTCRSGMCTTPLHVTSSQLIASEIFPVVVVKGLLYPGAAVNG 76

Query: 91  LIHNMSVPSWGNLLETYNLTAVKNASAVTDLH 122
           LIHNM+VPSW +LL+ YNLT VK ASAVTDL 
Sbjct: 77  LIHNMTVPSWDSLLDLYNLTGVKEASAVTDLQ 108


>Glyma04g07240.2 
          Length = 169

 Score =  114 bits (286), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 55/68 (80%), Positives = 60/68 (88%)

Query: 55  VCTNPLHVTSSQLIASEIFPVPVVKGLLYPGAVVHGLIHNMSVPSWGNLLETYNLTAVKN 114
           +CT PLHVTSSQLIASEIFPV VVKGLLYPGA V+GLIHNM+VPSW +LL+ YNLT VK 
Sbjct: 1   MCTTPLHVTSSQLIASEIFPVVVVKGLLYPGAAVNGLIHNMTVPSWDSLLDLYNLTGVKE 60

Query: 115 ASAVTDLH 122
           ASAVTDL 
Sbjct: 61  ASAVTDLQ 68


>Glyma07g03600.1 
          Length = 198

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 53/85 (62%), Gaps = 2/85 (2%)

Query: 39  LILFQIPLFR-VTCRSGVCTNPLHVTSSQLIASEIFPVPVVKGLLYPGAVVHGLIHNMSV 97
           +IL ++P    V CR G+C  PL VTSSQLIASE+FP+ +VK LLYPGA+   +    ++
Sbjct: 19  MILTKVPFISSVPCRFGICHTPLEVTSSQLIASEVFPLFIVKALLYPGALAKAICKLKTI 78

Query: 98  PSWGNLLETYNLTAVKNASAVTDLH 122
            S+ NLL  Y     +  SA +DL 
Sbjct: 79  QSYRNLLNLYQFN-TRAVSAASDLQ 102


>Glyma08g22490.1 
          Length = 147

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)

Query: 49  VTCRSGVCTNPLHVTSSQLIASEIFPVPVVKGLLYPGAVVHGLIHNMSVPSWGNLLETYN 108
           V CR G+C  PL VTSSQ IASE FP+ +VK LLYPGA+   +    ++PS+ NLL  + 
Sbjct: 1   VPCRFGICQTPLEVTSSQFIASEFFPLLIVKTLLYPGALAEAICKQKTIPSYRNLLNLHQ 60

Query: 109 LTAVKNASAVTDLH 122
             + +  SA +DL 
Sbjct: 61  FNS-RAVSAASDLQ 73