Miyakogusa Predicted Gene

Lj0g3v0146209.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0146209.1 tr|H6S0L9|H6S0L9_LOTJA CCD7-like protein OS=Lotus
japonicus GN=CCD7 PE=2 SV=1,99.49,0,seg,NULL; SUBFAMILY NOT
NAMED,NULL; BETA-CAROTENE DIOXYGENASE,Carotenoid oxygenase;
RPE65,Carotenoid,CUFF.8912.1
         (599 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g16370.1                                                       926   0.0  
Glyma01g14170.1                                                       576   e-164
Glyma04g11980.1                                                       201   2e-51
Glyma04g11800.1                                                       160   4e-39
Glyma19g11050.1                                                        88   3e-17

>Glyma11g16370.1 
          Length = 618

 Score =  926 bits (2394), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/532 (81%), Positives = 485/532 (91%), Gaps = 5/532 (0%)

Query: 73  ELDDSIVAPWDYQFLFMSQRSETTQPITLRVVDGAVPADFPTGTYYLTGPGILSDDHGST 132
           E DDS  A +DYQFLFMSQRSE T+P+TL  V+GA+PADFP+GTYYLTGPG+L+DDHGST
Sbjct: 56  EPDDSNAAYYDYQFLFMSQRSEATRPVTLSTVEGAIPADFPSGTYYLTGPGLLADDHGST 115

Query: 133 VHPLDGHGYLRAFTFDNNVTNKVKYMAKYIRTEAQLEEHDPKTNTWKFTHRGPFSVLKGG 192
           VHPLDGHGYLRAFTFDNNVT  VKYMAKYI+T+A +EEHDPKTN WKFTHRGPFSVLKGG
Sbjct: 116 VHPLDGHGYLRAFTFDNNVTKNVKYMAKYIKTDAHVEEHDPKTNKWKFTHRGPFSVLKGG 175

Query: 193 KKVGNTKVMKNVANTSVLKWGEKLLCMWEGGEPYEMESGTLDTIGRYNMMDDCDLDDHEN 252
           KKVGNTKVMKNVANTSVLKWGEKLLCMWEGGEPYE+++GTLDTIG+YNMMD  D+++H+ 
Sbjct: 176 KKVGNTKVMKNVANTSVLKWGEKLLCMWEGGEPYEIQAGTLDTIGQYNMMDGADMENHDQ 235

Query: 253 P---GDHDVWDVAASLLKPILYGVFKMPPRRLLSHYKIDSVRSRLLTVSCNAEDMLLPRS 309
               G  DVW+VAA+LLKPILYGVFKMPPRRLLSHYK+DS R+RLLTVSCNAEDMLLPRS
Sbjct: 236 SKGGGGGDVWEVAANLLKPILYGVFKMPPRRLLSHYKVDSRRNRLLTVSCNAEDMLLPRS 295

Query: 310 HFTFSEYDSNFQLVQKQKFKIPDHLMIHDWAFTDTHYIVFANRIKLDIPGSMAAVYGTSP 369
           +FTFSEYDSNF +VQKQ F+IPDHLMIHDWAFTDTHYIVFANRIKLD+ GSMAAVYG SP
Sbjct: 296 NFTFSEYDSNFNVVQKQVFRIPDHLMIHDWAFTDTHYIVFANRIKLDVLGSMAAVYGMSP 355

Query: 370 MIAALKVNPSKSTSPIYLLPRFPENSKCKERDWRVPVEVPSQLWLIHVGNAFQVTHAHGN 429
           MI+AL+VNPSKSTSPIYL+PRFP  +  KERDWRVPVE PSQLWL+HVGNAF+V H HGN
Sbjct: 356 MISALRVNPSKSTSPIYLIPRFPGKNNGKERDWRVPVEAPSQLWLLHVGNAFEVRHPHGN 415

Query: 430 LDIQIQATACSYQWFNFRKLFGYNWQKQNLDPSIMNIEGDSELLPHLVQVSIRLDSDYNC 489
           LDI+IQA ACSYQWFNF KLFGY+WQK+ LDPSIMN++G S+LLPHLVQVSI+LDSDYNC
Sbjct: 416 LDIKIQAAACSYQWFNFSKLFGYDWQKKKLDPSIMNVKGGSKLLPHLVQVSIKLDSDYNC 475

Query: 490 QECDVKPMQKWKKSSDFPITNPAFSGKENRYLYAATTLGSRKSLPSFPFDTVVKLDL-VS 548
           QECDVKPM+KWKKSSDFP TNP FSGK+N+YLYAATTLGSRK+LP FPFDTVVKLDL  +
Sbjct: 476 QECDVKPMKKWKKSSDFPATNPTFSGKKNKYLYAATTLGSRKTLPCFPFDTVVKLDLETT 535

Query: 549 DSV-QTWTVDSRKFIGEPIFVPKGDQEDDGYLLVVEYAVSKPRCYLVILNPR 599
           +SV QTWT  SR+FIGEPIFVPKG QEDDGYLLVVEYAVS  RCYLVIL+P+
Sbjct: 536 ESVAQTWTAGSRRFIGEPIFVPKGYQEDDGYLLVVEYAVSMNRCYLVILDPK 587


>Glyma01g14170.1 
          Length = 355

 Score =  576 bits (1485), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 269/329 (81%), Positives = 302/329 (91%), Gaps = 1/329 (0%)

Query: 272 GVFKMPPRRLLSHYKIDSVRSRLLTVSCNAEDMLLPRSHFTFSEYDSNFQLVQKQKFKIP 331
           GVFKMPPRRLLSHYK+DS R+RLLTVSCNAEDMLLPRS+FTF+EYDSNF +VQKQ F+IP
Sbjct: 1   GVFKMPPRRLLSHYKVDSRRNRLLTVSCNAEDMLLPRSNFTFAEYDSNFNVVQKQVFRIP 60

Query: 332 DHLMIHDWAFTDTHYIVFANRIKLDIPGSMAAVYGTSPMIAALKVNPSKSTSPIYLLPRF 391
           DHLMIHDWA TDTHYIVFANRIKLD+ GS+AAVYG SPM++AL+VNPSKSTSPIYL+PRF
Sbjct: 61  DHLMIHDWAVTDTHYIVFANRIKLDVLGSIAAVYGMSPMVSALRVNPSKSTSPIYLIPRF 120

Query: 392 PENSKCKERDWRVPVEVPSQLWLIHVGNAFQVTHAHGNLDIQIQATACSYQWFNFRKLFG 451
           P+ +K KERDWRVP E PSQLWL+HVGNAF++ + H NLDIQIQA ACSYQWFNF KLFG
Sbjct: 121 PDKNKDKERDWRVPFEAPSQLWLLHVGNAFEIRYPHRNLDIQIQAAACSYQWFNFSKLFG 180

Query: 452 YNWQKQNLDPSIMNIEGDSELLPHLVQVSIRLDSDYNCQECDVKPMQKWKKSSDFPITNP 511
           Y+WQK+ LDPSIMN++G +ELLPHLVQVSI+LDSDYNCQECDVKPM+KW+KSSDFP TNP
Sbjct: 181 YDWQKKKLDPSIMNVKGGNELLPHLVQVSIKLDSDYNCQECDVKPMKKWQKSSDFPATNP 240

Query: 512 AFSGKENRYLYAATTLGSRKSLPSFPFDTVVKLDLVSD-SVQTWTVDSRKFIGEPIFVPK 570
            FSGK+N+YLYAATTLGSRK+LP FPFDTVVKLDL SD S QTWT  SR+FIGEPIFVPK
Sbjct: 241 TFSGKKNKYLYAATTLGSRKTLPCFPFDTVVKLDLESDNSAQTWTAGSRRFIGEPIFVPK 300

Query: 571 GDQEDDGYLLVVEYAVSKPRCYLVILNPR 599
           GD+EDDGYLLVVEYAVS  RCYLVIL+P+
Sbjct: 301 GDEEDDGYLLVVEYAVSMNRCYLVILDPK 329


>Glyma04g11980.1 
          Length = 166

 Score =  201 bits (511), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 107/186 (57%), Positives = 120/186 (64%), Gaps = 38/186 (20%)

Query: 270 LYGVFKMPPRRLLSHYKIDSVRSRLLTVSCNAEDMLLPRSHFTFSE----YDSNFQLVQK 325
           LY +    P  + +H K+DS R+RLLTVSCNAEDMLLPRS+FTFS     Y  NF L+ +
Sbjct: 14  LYSLSLPKPVLVATHCKVDSRRNRLLTVSCNAEDMLLPRSNFTFSGKFSLYPKNFNLIYR 73

Query: 326 QKFKIPDHLMIHDWAFTDTHYIVFANRIKLDIPGSMAAVYGTSPMIAALKVNPSKSTSPI 385
                                             SMAAVYG SPMI +L VNPSKSTSPI
Sbjct: 74  ----------------------------------SMAAVYGMSPMILSLMVNPSKSTSPI 99

Query: 386 YLLPRFPENSKCKERDWRVPVEVPSQLWLIHVGNAFQVTHAHGNLDIQIQATACSYQWFN 445
           YL+PRFP  +  KERDWRVPVE PSQLWL+HVGNAF+V H H NLDIQIQA ACSYQWFN
Sbjct: 100 YLIPRFPGKNNGKERDWRVPVEAPSQLWLLHVGNAFEVRHPHRNLDIQIQAAACSYQWFN 159

Query: 446 FRKLFG 451
           F KLFG
Sbjct: 160 FSKLFG 165


>Glyma04g11800.1 
          Length = 90

 Score =  160 bits (405), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 73/88 (82%), Positives = 77/88 (87%)

Query: 359 GSMAAVYGTSPMIAALKVNPSKSTSPIYLLPRFPENSKCKERDWRVPVEVPSQLWLIHVG 418
           GSMAAVYG SPMI AL VNPSKSTSPIYL+PRFP  +  KERDWRVPVE PSQLWL+HVG
Sbjct: 1   GSMAAVYGMSPMILALMVNPSKSTSPIYLIPRFPGKNNGKERDWRVPVEAPSQLWLLHVG 60

Query: 419 NAFQVTHAHGNLDIQIQATACSYQWFNF 446
           NAF+V H HGNLDIQIQA ACSYQWFNF
Sbjct: 61  NAFEVRHPHGNLDIQIQAAACSYQWFNF 88


>Glyma19g11050.1 
          Length = 53

 Score = 87.8 bits (216), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/52 (78%), Positives = 45/52 (86%)

Query: 361 MAAVYGTSPMIAALKVNPSKSTSPIYLLPRFPENSKCKERDWRVPVEVPSQL 412
           MAA+YG SPMI AL+VNPSKSTSPIYL+PRFP  +  KERDWRVPVE PSQL
Sbjct: 1   MAALYGMSPMILALRVNPSKSTSPIYLIPRFPGKNNGKERDWRVPVEAPSQL 52