Miyakogusa Predicted Gene

Lj0g3v0135879.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0135879.1 Non Chatacterized Hit- tr|Q9SK70|Q9SK70_ARATH
Putative uncharacterized protein At2g20320
OS=Arabidop,51.58,3e-19,seg,NULL,17814_g.1
         (109 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g32580.1                                                       134   3e-32
Glyma19g35330.1                                                       130   4e-31

>Glyma03g32580.1 
          Length = 739

 Score =  134 bits (336), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 77/100 (77%), Gaps = 8/100 (8%)

Query: 11  AFRVAGEAWQNMYXXXXXXXXXXXXXMPQMGPGAHRRCQSELVTK-GFQRSSSFQKLKCH 69
           AFRVAGEA+ NMY             MPQMGPGAHRRCQSELVT+ G QR++SFQKL+ H
Sbjct: 1   AFRVAGEAFHNMYSGGGSS-------MPQMGPGAHRRCQSELVTREGVQRNNSFQKLRSH 53

Query: 70  VQKAWRWSGRSRDENSLPNFNPEVMANQKRQWYQLHPKSM 109
           V KAWRW GR R+E S  +FNPEVMANQKRQWY+LHPK++
Sbjct: 54  VHKAWRWGGRFREEVSPASFNPEVMANQKRQWYRLHPKNL 93


>Glyma19g35330.1 
          Length = 729

 Score =  130 bits (326), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 64/99 (64%), Positives = 73/99 (73%), Gaps = 7/99 (7%)

Query: 11  AFRVAGEAWQNMYXXXXXXXXXXXXXMPQMGPGAHRRCQSELVTKGFQRSSSFQKLKCHV 70
           AFRVAGEA+ NMY               QMGPGAHRR QSELVT+G +R++SFQKL+ HV
Sbjct: 1   AFRVAGEAFHNMYSGGGSSKS-------QMGPGAHRRSQSELVTRGVERTNSFQKLRSHV 53

Query: 71  QKAWRWSGRSRDENSLPNFNPEVMANQKRQWYQLHPKSM 109
            KAWRW GR R E S  +FNPEVMANQKRQWYQLHP+S+
Sbjct: 54  HKAWRWGGRFRQEVSPASFNPEVMANQKRQWYQLHPRSL 92