Miyakogusa Predicted Gene

Lj0g3v0128219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0128219.1 tr|B9HNX6|B9HNX6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_650065 PE=4
SV=1,56.19,2e-19,seg,NULL; PST2_GOSHI_P31336;,NULL,CUFF.7719.1
         (107 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g43100.1                                                       120   3e-28
Glyma10g11550.1                                                       110   3e-25
Glyma15g43110.1                                                       110   4e-25
Glyma10g11570.1                                                       100   3e-22

>Glyma15g43100.1 
          Length = 104

 Score =  120 bits (301), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 64/103 (62%), Positives = 71/103 (68%), Gaps = 1/103 (0%)

Query: 1   MASFTMTASILGSPVLTNRSAVATQRR-FVVNAAATRAVEGDNKVNEEGSNNGRRNLMFX 59
           MASFTMTASILGSP +TNRSAVATQRR  VVNAA     E  +  N+   +NGRRNLMF 
Sbjct: 1   MASFTMTASILGSPAVTNRSAVATQRRSLVVNAAKAVEAEKVSYDNDMDGSNGRRNLMFA 60

Query: 60  XXXXXXXXXXXXXXXDEPKNGSPEAKKKYAPVCVTMPTARVCR 102
                          DEPK G+PEAKKKYAP+CVTMPTAR+CR
Sbjct: 61  AAAAAVCSVAGMAVADEPKPGTPEAKKKYAPICVTMPTARICR 103


>Glyma10g11550.1 
          Length = 104

 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 60/103 (58%), Positives = 69/103 (66%), Gaps = 1/103 (0%)

Query: 1   MASFTMTASILGSPVLTNRSAVATQRRFVVNAAATRAVEGDNKVNEEGSNNGRRNLMFXX 60
           MASFTMTASILG P +TNRSA ATQRR VV  AA+++VEG+    +   +N RRNLMF  
Sbjct: 1   MASFTMTASILGCPAVTNRSAAATQRRSVVVNAASKSVEGEKVSYDNNGSNARRNLMFAT 60

Query: 61  XXXXXXXXXX-XXXXDEPKNGSPEAKKKYAPVCVTMPTARVCR 102
                          DEPK G+ EAKKKYAPVCVT PTAR+CR
Sbjct: 61  AAAAVCSFAAGMALADEPKPGTSEAKKKYAPVCVTNPTARICR 103


>Glyma15g43110.1 
          Length = 133

 Score =  110 bits (275), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 61/104 (58%), Positives = 68/104 (65%), Gaps = 2/104 (1%)

Query: 1   MASFTMTASILGSPVLTNRSAVATQRR-FVVNAAATRAVEGDNKVNEEGSNNGRRNLMFX 59
           MASFTMTASILG P +TNR AVATQRR  VVNAA     E  +  N+   +NGRRNLMF 
Sbjct: 29  MASFTMTASILGGPAVTNRLAVATQRRSLVVNAAKAVEAEKVSYDNDMDGSNGRRNLMFA 88

Query: 60  XXXXXXXXXXX-XXXXDEPKNGSPEAKKKYAPVCVTMPTARVCR 102
                           DEPK G+P AKKKYAP+CVTMPTAR+CR
Sbjct: 89  AAAAAAVCSVAGMAVADEPKPGTPAAKKKYAPICVTMPTARICR 132


>Glyma10g11570.1 
          Length = 486

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 56/102 (54%), Positives = 64/102 (62%), Gaps = 2/102 (1%)

Query: 1   MASFTMTASILGSPVLTNRSAVATQRRFVVNAAATRAVEGDNKVNEEGSNNGRRNLMFXX 60
           MASFTMTASI G P +T RSAVA QRR +V +AA    EG+    +   +NGRRNLMF  
Sbjct: 386 MASFTMTASIFGCPAVTKRSAVAAQRRLLVVSAAK--AEGEKVSYDNNDSNGRRNLMFAV 443

Query: 61  XXXXXXXXXXXXXXDEPKNGSPEAKKKYAPVCVTMPTARVCR 102
                         DEPK G+ EAKKKYAPVCVT PTA +CR
Sbjct: 444 AAAAVFSVAGMAVADEPKPGTSEAKKKYAPVCVTNPTASICR 485