Miyakogusa Predicted Gene

Lj0g3v0127389.1
Show Alignment: 
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0127389.1 Non Chatacterized Hit- tr|D8T6S5|D8T6S5_SELML
Putative uncharacterized protein EID1-2
OS=Selaginella,32.12,8e-17,seg,NULL; F-box domain,F-box domain,
cyclin-like; no description,NULL; F-box-like,NULL,CUFF.7662.1
         (312 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g37230.1                                                       389   e-108
Glyma02g02200.1                                                       190   1e-48
Glyma08g22270.1                                                        72   5e-13
Glyma14g24490.1                                                        59   1e-08
Glyma18g49920.2                                                        55   1e-07
Glyma18g49920.1                                                        55   1e-07
Glyma08g26400.2                                                        51   1e-06
Glyma08g26400.1                                                        51   1e-06

>Glyma03g37230.1 
          Length = 327

 Score =  389 bits (998), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 202/324 (62%), Positives = 230/324 (70%), Gaps = 21/324 (6%)

Query: 3   LFSALTDDIVLNIFAKLEDDPRDWARLSCVCTRFSSLITDFCWKNKCSRSIPPDLLSA-- 60
           LFS LTDDIVLNIF KLEDDPR WARL+CVCT+FSSL+ DFCWK KCS +IP DLLSA  
Sbjct: 11  LFSELTDDIVLNIFYKLEDDPRHWARLACVCTKFSSLVRDFCWKTKCSLTIPQDLLSAAA 70

Query: 61  TDPPLSLHKLCLCCPGLLHAGLLFDTSDFGLDRDLGPDHHHHXXXXXXXXXXXXXXXXXX 120
           +DPPLSLHKL  CCPGL HAGLLFDTSDFGL+RDLGP + +                   
Sbjct: 71  SDPPLSLHKLSFCCPGLRHAGLLFDTSDFGLERDLGPGNFNVITDDSPSNTTPPPPPPPP 130

Query: 121 XXXESSGWS----------LFDDLFYDTVYAAXXXXXXXXXXXXXXXXXXXVVRQGV-VA 169
              +               L+DDL+YDT+Y                      VR GV VA
Sbjct: 131 QQQQQQPPQSDDCSSSCWSLYDDLYYDTLYVPTESESPRLTESVS-------VRAGVDVA 183

Query: 170 EARE-TKKRKVCGARGSHLATGTWNLSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRK 228
                +KKRK+  A  SHLA+G+W LSREQGSKLLAR+FR DCLYVC+WPGCVH EEKRK
Sbjct: 184 SISACSKKRKLSRAWSSHLASGSWTLSREQGSKLLARKFRYDCLYVCEWPGCVHKEEKRK 243

Query: 229 YMLFRGVFKNFKRTRVWRTINDGNRRKLDLPCAFCACKHTWDLHSAFCLRRGFGFHDDGE 288
           Y LFRGVFKNF+RT VWRTI DG +RK+DLPCAFCAC+ TWDLHS+FCLR GFGFHDDGE
Sbjct: 244 YCLFRGVFKNFRRTMVWRTIQDGKKRKMDLPCAFCACEFTWDLHSSFCLRPGFGFHDDGE 303

Query: 289 PVVRAFVCDNGHVSGAWTDVPMYA 312
           P+VRA+VC+NGHVSGAWTD+P+Y 
Sbjct: 304 PMVRAYVCENGHVSGAWTDLPIYT 327


>Glyma02g02200.1 
          Length = 189

 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 84/119 (70%), Positives = 102/119 (85%)

Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRTINDGNR 253
           L +  G KLLARQFRDD L++CDWPGCVHS ++R YMLFRG F NFK + VWR+I+D  R
Sbjct: 71  LLKLAGCKLLARQFRDDNLFLCDWPGCVHSYQRRDYMLFRGFFHNFKASGVWRSISDEKR 130

Query: 254 RKLDLPCAFCACKHTWDLHSAFCLRRGFGFHDDGEPVVRAFVCDNGHVSGAWTDVPMYA 312
           RK+D+ CAFC C+HTWDL SAFCLRRGFG+H DGEPVVRA+VC+NGHVSGAWT++P+Y+
Sbjct: 131 RKIDVECAFCTCQHTWDLQSAFCLRRGFGYHLDGEPVVRAYVCENGHVSGAWTNIPLYS 189



 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 36/52 (69%), Positives = 44/52 (84%)

Query: 3  LFSALTDDIVLNIFAKLEDDPRDWARLSCVCTRFSSLITDFCWKNKCSRSIP 54
          +F+ALTDDIVL+I AKL+DDPR WAR +CV TRFS+LI  FCWK KCS++ P
Sbjct: 5  VFAALTDDIVLSILAKLDDDPRHWARAACVSTRFSTLIRHFCWKTKCSQTFP 56


>Glyma08g22270.1 
          Length = 104

 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/45 (68%), Positives = 37/45 (82%)

Query: 255 KLDLPCAFCACKHTWDLHSAFCLRRGFGFHDDGEPVVRAFVCDNG 299
           KL +   F AC+ TWDL SAFCLR GFGFHDDGEPVV+++VC+NG
Sbjct: 58  KLGIEPKFYACEFTWDLQSAFCLRPGFGFHDDGEPVVKSYVCENG 102


>Glyma14g24490.1 
          Length = 53

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 9/60 (15%)

Query: 219 GCVHSEEKRKYMLFRGVFKNFKRTRVWRTINDGNRRKLDLPCAFCACKHTWDLHSAFCLR 278
           GCVHS     YMLFRG F            ND  RRK+++ CAFC C+ TWDL +AFC R
Sbjct: 2   GCVHSHHWCNYMLFRGFF---------HKCNDKKRRKINVECAFCTCQPTWDLQAAFCPR 52


>Glyma18g49920.2 
          Length = 248

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 9/122 (7%)

Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRT-INDGN 252
            SR  G   L  Q R D LYVCD    +   E+     FRG+FK+F  ++V +  IN G 
Sbjct: 121 FSRTSGKSFLLPQCRTDVLYVCDPCEHLDQGEEGDVGFFRGIFKSFATSKVRKMLINKGA 180

Query: 253 RRKLDLPCAFCACKHTWDLHSAFCLRRG----FGFHDDGEPVVRAFVCDNGHVSGAWTDV 308
           +      C +C  K  W +  A  + +      G +DD    +  +VC NGH+ G  T +
Sbjct: 181 KLHPTEVCPYCKAK-LWSMLQAKMIPQSASCRLGSYDD---CIEYYVCLNGHMLGICTLL 236

Query: 309 PM 310
           P+
Sbjct: 237 PL 238


>Glyma18g49920.1 
          Length = 248

 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 9/122 (7%)

Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRT-INDGN 252
            SR  G   L  Q R D LYVCD    +   E+     FRG+FK+F  ++V +  IN G 
Sbjct: 121 FSRTSGKSFLLPQCRTDVLYVCDPCEHLDQGEEGDVGFFRGIFKSFATSKVRKMLINKGA 180

Query: 253 RRKLDLPCAFCACKHTWDLHSAFCLRRG----FGFHDDGEPVVRAFVCDNGHVSGAWTDV 308
           +      C +C  K  W +  A  + +      G +DD    +  +VC NGH+ G  T +
Sbjct: 181 KLHPTEVCPYCKAK-LWSMLQAKMIPQSASCRLGSYDD---CIEYYVCLNGHMLGICTLL 236

Query: 309 PM 310
           P+
Sbjct: 237 PL 238


>Glyma08g26400.2 
          Length = 248

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRT-INDGN 252
            SR  G   L  Q R D LYV D    +   E+     FRG+FK+F  ++V +  IN G 
Sbjct: 121 FSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDVGFFRGIFKSFATSKVRKMLINKGA 180

Query: 253 RRKLDLPCAFCACKHTWDLHSAFCLRRG----FGFHDDGEPVVRAFVCDNGHVSGAWTDV 308
           +      C +C  K  W +  A  + +      G +DD    +  +VC NGH+ G  T +
Sbjct: 181 KLHPTEVCPYCKAK-LWSMLQAKMIPQSASCRLGSYDD---CIEYYVCLNGHMLGICTLL 236

Query: 309 PM 310
           P+
Sbjct: 237 PL 238


>Glyma08g26400.1 
          Length = 248

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 9/122 (7%)

Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRT-INDGN 252
            SR  G   L  Q R D LYV D    +   E+     FRG+FK+F  ++V +  IN G 
Sbjct: 121 FSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDVGFFRGIFKSFATSKVRKMLINKGA 180

Query: 253 RRKLDLPCAFCACKHTWDLHSAFCLRRG----FGFHDDGEPVVRAFVCDNGHVSGAWTDV 308
           +      C +C  K  W +  A  + +      G +DD    +  +VC NGH+ G  T +
Sbjct: 181 KLHPTEVCPYCKAK-LWSMLQAKMIPQSASCRLGSYDD---CIEYYVCLNGHMLGICTLL 236

Query: 309 PM 310
           P+
Sbjct: 237 PL 238