Miyakogusa Predicted Gene
- Lj0g3v0127389.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0127389.1 Non Chatacterized Hit- tr|D8T6S5|D8T6S5_SELML
Putative uncharacterized protein EID1-2
OS=Selaginella,32.12,8e-17,seg,NULL; F-box domain,F-box domain,
cyclin-like; no description,NULL; F-box-like,NULL,CUFF.7662.1
(312 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g37230.1 389 e-108
Glyma02g02200.1 190 1e-48
Glyma08g22270.1 72 5e-13
Glyma14g24490.1 59 1e-08
Glyma18g49920.2 55 1e-07
Glyma18g49920.1 55 1e-07
Glyma08g26400.2 51 1e-06
Glyma08g26400.1 51 1e-06
>Glyma03g37230.1
Length = 327
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/324 (62%), Positives = 230/324 (70%), Gaps = 21/324 (6%)
Query: 3 LFSALTDDIVLNIFAKLEDDPRDWARLSCVCTRFSSLITDFCWKNKCSRSIPPDLLSA-- 60
LFS LTDDIVLNIF KLEDDPR WARL+CVCT+FSSL+ DFCWK KCS +IP DLLSA
Sbjct: 11 LFSELTDDIVLNIFYKLEDDPRHWARLACVCTKFSSLVRDFCWKTKCSLTIPQDLLSAAA 70
Query: 61 TDPPLSLHKLCLCCPGLLHAGLLFDTSDFGLDRDLGPDHHHHXXXXXXXXXXXXXXXXXX 120
+DPPLSLHKL CCPGL HAGLLFDTSDFGL+RDLGP + +
Sbjct: 71 SDPPLSLHKLSFCCPGLRHAGLLFDTSDFGLERDLGPGNFNVITDDSPSNTTPPPPPPPP 130
Query: 121 XXXESSGWS----------LFDDLFYDTVYAAXXXXXXXXXXXXXXXXXXXVVRQGV-VA 169
+ L+DDL+YDT+Y VR GV VA
Sbjct: 131 QQQQQQPPQSDDCSSSCWSLYDDLYYDTLYVPTESESPRLTESVS-------VRAGVDVA 183
Query: 170 EARE-TKKRKVCGARGSHLATGTWNLSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRK 228
+KKRK+ A SHLA+G+W LSREQGSKLLAR+FR DCLYVC+WPGCVH EEKRK
Sbjct: 184 SISACSKKRKLSRAWSSHLASGSWTLSREQGSKLLARKFRYDCLYVCEWPGCVHKEEKRK 243
Query: 229 YMLFRGVFKNFKRTRVWRTINDGNRRKLDLPCAFCACKHTWDLHSAFCLRRGFGFHDDGE 288
Y LFRGVFKNF+RT VWRTI DG +RK+DLPCAFCAC+ TWDLHS+FCLR GFGFHDDGE
Sbjct: 244 YCLFRGVFKNFRRTMVWRTIQDGKKRKMDLPCAFCACEFTWDLHSSFCLRPGFGFHDDGE 303
Query: 289 PVVRAFVCDNGHVSGAWTDVPMYA 312
P+VRA+VC+NGHVSGAWTD+P+Y
Sbjct: 304 PMVRAYVCENGHVSGAWTDLPIYT 327
>Glyma02g02200.1
Length = 189
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 84/119 (70%), Positives = 102/119 (85%)
Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRTINDGNR 253
L + G KLLARQFRDD L++CDWPGCVHS ++R YMLFRG F NFK + VWR+I+D R
Sbjct: 71 LLKLAGCKLLARQFRDDNLFLCDWPGCVHSYQRRDYMLFRGFFHNFKASGVWRSISDEKR 130
Query: 254 RKLDLPCAFCACKHTWDLHSAFCLRRGFGFHDDGEPVVRAFVCDNGHVSGAWTDVPMYA 312
RK+D+ CAFC C+HTWDL SAFCLRRGFG+H DGEPVVRA+VC+NGHVSGAWT++P+Y+
Sbjct: 131 RKIDVECAFCTCQHTWDLQSAFCLRRGFGYHLDGEPVVRAYVCENGHVSGAWTNIPLYS 189
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 44/52 (84%)
Query: 3 LFSALTDDIVLNIFAKLEDDPRDWARLSCVCTRFSSLITDFCWKNKCSRSIP 54
+F+ALTDDIVL+I AKL+DDPR WAR +CV TRFS+LI FCWK KCS++ P
Sbjct: 5 VFAALTDDIVLSILAKLDDDPRHWARAACVSTRFSTLIRHFCWKTKCSQTFP 56
>Glyma08g22270.1
Length = 104
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 255 KLDLPCAFCACKHTWDLHSAFCLRRGFGFHDDGEPVVRAFVCDNG 299
KL + F AC+ TWDL SAFCLR GFGFHDDGEPVV+++VC+NG
Sbjct: 58 KLGIEPKFYACEFTWDLQSAFCLRPGFGFHDDGEPVVKSYVCENG 102
>Glyma14g24490.1
Length = 53
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 35/60 (58%), Gaps = 9/60 (15%)
Query: 219 GCVHSEEKRKYMLFRGVFKNFKRTRVWRTINDGNRRKLDLPCAFCACKHTWDLHSAFCLR 278
GCVHS YMLFRG F ND RRK+++ CAFC C+ TWDL +AFC R
Sbjct: 2 GCVHSHHWCNYMLFRGFF---------HKCNDKKRRKINVECAFCTCQPTWDLQAAFCPR 52
>Glyma18g49920.2
Length = 248
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRT-INDGN 252
SR G L Q R D LYVCD + E+ FRG+FK+F ++V + IN G
Sbjct: 121 FSRTSGKSFLLPQCRTDVLYVCDPCEHLDQGEEGDVGFFRGIFKSFATSKVRKMLINKGA 180
Query: 253 RRKLDLPCAFCACKHTWDLHSAFCLRRG----FGFHDDGEPVVRAFVCDNGHVSGAWTDV 308
+ C +C K W + A + + G +DD + +VC NGH+ G T +
Sbjct: 181 KLHPTEVCPYCKAK-LWSMLQAKMIPQSASCRLGSYDD---CIEYYVCLNGHMLGICTLL 236
Query: 309 PM 310
P+
Sbjct: 237 PL 238
>Glyma18g49920.1
Length = 248
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRT-INDGN 252
SR G L Q R D LYVCD + E+ FRG+FK+F ++V + IN G
Sbjct: 121 FSRTSGKSFLLPQCRTDVLYVCDPCEHLDQGEEGDVGFFRGIFKSFATSKVRKMLINKGA 180
Query: 253 RRKLDLPCAFCACKHTWDLHSAFCLRRG----FGFHDDGEPVVRAFVCDNGHVSGAWTDV 308
+ C +C K W + A + + G +DD + +VC NGH+ G T +
Sbjct: 181 KLHPTEVCPYCKAK-LWSMLQAKMIPQSASCRLGSYDD---CIEYYVCLNGHMLGICTLL 236
Query: 309 PM 310
P+
Sbjct: 237 PL 238
>Glyma08g26400.2
Length = 248
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRT-INDGN 252
SR G L Q R D LYV D + E+ FRG+FK+F ++V + IN G
Sbjct: 121 FSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDVGFFRGIFKSFATSKVRKMLINKGA 180
Query: 253 RRKLDLPCAFCACKHTWDLHSAFCLRRG----FGFHDDGEPVVRAFVCDNGHVSGAWTDV 308
+ C +C K W + A + + G +DD + +VC NGH+ G T +
Sbjct: 181 KLHPTEVCPYCKAK-LWSMLQAKMIPQSASCRLGSYDD---CIEYYVCLNGHMLGICTLL 236
Query: 309 PM 310
P+
Sbjct: 237 PL 238
>Glyma08g26400.1
Length = 248
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 194 LSREQGSKLLARQFRDDCLYVCDWPGCVHSEEKRKYMLFRGVFKNFKRTRVWRT-INDGN 252
SR G L Q R D LYV D + E+ FRG+FK+F ++V + IN G
Sbjct: 121 FSRTSGKSFLLPQCRTDVLYVSDPCEHLDQGEEGDVGFFRGIFKSFATSKVRKMLINKGA 180
Query: 253 RRKLDLPCAFCACKHTWDLHSAFCLRRG----FGFHDDGEPVVRAFVCDNGHVSGAWTDV 308
+ C +C K W + A + + G +DD + +VC NGH+ G T +
Sbjct: 181 KLHPTEVCPYCKAK-LWSMLQAKMIPQSASCRLGSYDD---CIEYYVCLNGHMLGICTLL 236
Query: 309 PM 310
P+
Sbjct: 237 PL 238