Miyakogusa Predicted Gene

Lj0g3v0109499.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0109499.1 tr|I3T8R8|I3T8R8_LOTJA Peptidyl-prolyl cis-trans
isomerase OS=Lotus japonicus PE=4
SV=1,97.78,3e-18,FKBP_PPIASE,Peptidyl-prolyl cis-trans isomerase,
FKBP-type, domain; FKBP_C,Peptidyl-prolyl cis-trans,CUFF.6291.1
         (45 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g10730.2                                                        75   2e-14
Glyma16g10730.1                                                        75   2e-14
Glyma03g21690.1                                                        73   8e-14
Glyma08g46090.2                                                        70   7e-13
Glyma08g46090.1                                                        70   7e-13
Glyma05g28260.1                                                        69   1e-12
Glyma08g11240.1                                                        68   2e-12
Glyma18g32830.1                                                        66   8e-12
Glyma07g20830.1                                                        61   3e-10

>Glyma16g10730.2 
          Length = 564

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/37 (89%), Positives = 33/37 (89%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          EAGDEV VHYTGTLLDGTKFDSSR RG PF FTLGQG
Sbjct: 56 EAGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQG 92


>Glyma16g10730.1 
          Length = 574

 Score = 74.7 bits (182), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/37 (89%), Positives = 33/37 (89%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          EAGDEV VHYTGTLLDGTKFDSSR RG PF FTLGQG
Sbjct: 56 EAGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQG 92


>Glyma03g21690.1 
          Length = 582

 Score = 72.8 bits (177), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/37 (86%), Positives = 32/37 (86%)

Query: 9   EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
           E GDEV VHYTGTLLDGTKFDSSR RG PF FTLGQG
Sbjct: 64  EVGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQG 100


>Glyma08g46090.2 
          Length = 544

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/37 (83%), Positives = 31/37 (83%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          E GDEV VHYTGTLLDGTKFDSSR R  PF FTLGQG
Sbjct: 46 EVGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQG 82


>Glyma08g46090.1 
          Length = 544

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/37 (83%), Positives = 31/37 (83%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          E GDEV VHYTGTLLDGTKFDSSR R  PF FTLGQG
Sbjct: 46 EVGDEVQVHYTGTLLDGTKFDSSRDRDSPFSFTLGQG 82


>Glyma05g28260.1 
          Length = 570

 Score = 68.6 bits (166), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/37 (78%), Positives = 32/37 (86%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          ++GD+V VHYTGTLLDGTKFDSSR RG PF F LGQG
Sbjct: 54 DSGDQVEVHYTGTLLDGTKFDSSRDRGTPFKFKLGQG 90


>Glyma08g11240.1 
          Length = 570

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/37 (78%), Positives = 31/37 (83%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          + GD+V VHYTGTLLDGTKFDSSR RG PF F LGQG
Sbjct: 54 DCGDQVEVHYTGTLLDGTKFDSSRDRGTPFKFRLGQG 90


>Glyma18g32830.1 
          Length = 544

 Score = 66.2 bits (160), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/37 (81%), Positives = 30/37 (81%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          E GDEV  HYTGTLLDGTKFDSSR R  PF FTLGQG
Sbjct: 46 EVGDEVQGHYTGTLLDGTKFDSSRDRDSPFSFTLGQG 82


>Glyma07g20830.1 
          Length = 144

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/37 (75%), Positives = 30/37 (81%)

Query: 9  EAGDEVNVHYTGTLLDGTKFDSSRHRGIPFDFTLGQG 45
          + GD+V VHYTGTLLDGTKFD SR RG PF F LGQG
Sbjct: 54 DCGDQVEVHYTGTLLDGTKFDYSRDRGTPFKFRLGQG 90