Miyakogusa Predicted Gene

Lj0g3v0108459.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0108459.2 Non Chatacterized Hit- tr|H2ZU33|H2ZU33_LATCH
Uncharacterized protein OS=Latimeria chalumnae
GN=FBXO,25.19,2e-17,ApaG-like,ApaG domain; F-box domain,F-box domain,
cyclin-like; FBOX,F-box domain, cyclin-like; APAG,,CUFF.6249.2
         (360 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g13500.1                                                       336   2e-92
Glyma12g05510.1                                                       335   4e-92
Glyma11g13500.2                                                       288   8e-78
Glyma14g12250.1                                                       119   6e-27
Glyma04g15180.1                                                        93   4e-19
Glyma17g09620.1                                                        55   1e-07
Glyma05g02320.1                                                        54   2e-07

>Glyma11g13500.1 
          Length = 443

 Score =  336 bits (862), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 154/185 (83%), Positives = 171/185 (92%)

Query: 176 QQDAMLLWFEEHGRRLQQGFIKLHEEGNNRSINLFPEEPPLCSTAITNGVQVRASALFVP 235
           QQDAMLLW EEHGRRL+ GFIKLH++GN +SINLFPEEPPLCS A+TNGV+VRASAL +P
Sbjct: 259 QQDAMLLWLEEHGRRLEHGFIKLHDKGNGKSINLFPEEPPLCSMAVTNGVKVRASALVIP 318

Query: 236 ELSDLQDDLEKYLFAYSIRMSLHPEGCIINGMSFSSCQLHWRHWIIRANDIVVSDVNGEA 295
           EL DLQDDLEKYLFAYSIR+SL P+GC INGMSFSSCQLHWRHWIIRANDIV+SDVNGEA
Sbjct: 319 ELIDLQDDLEKYLFAYSIRLSLEPQGCTINGMSFSSCQLHWRHWIIRANDIVISDVNGEA 378

Query: 296 VIGMFPLLRPGAEEFVYQSCTYLPTSSGSVEGSFTFVPGRLANPKGDSFLATVDRFPIQL 355
           VIG +PLLRPGA+EFVYQS  +LPT SGS+EGSFTF+PGRLA+PKGD FLATV RFP+QL
Sbjct: 379 VIGQYPLLRPGAQEFVYQSRMHLPTPSGSIEGSFTFIPGRLADPKGDPFLATVARFPLQL 438

Query: 356 PDYIF 360
           PDYIF
Sbjct: 439 PDYIF 443



 Score =  273 bits (697), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 131/174 (75%), Positives = 146/174 (83%), Gaps = 1/174 (0%)

Query: 2   MGLETVVDLAIHDVLRRLSPEDIARVACVSKKLRSLAFDDDSLWLTICISELDLHQPLDH 61
           MGLE+V DLAIH +L +L  +D ARVACVSK+  S A  DD+LW+  C  EL L QPLDH
Sbjct: 1   MGLESVGDLAIHVILSKLGAQDTARVACVSKRFCSSA-SDDTLWINHCFHELALTQPLDH 59

Query: 62  LGNPLPSFKATYQAWREAFAMYPWSLVKRVKQCWDKLKTWLVNNFPEAEATLCKGASEAE 121
           LGNPL SFK  YQAWR AF MYPWSLVKRVK+CWDK+KTWL NNFPEAEATLCKGA+EA+
Sbjct: 60  LGNPLSSFKECYQAWRGAFVMYPWSLVKRVKRCWDKIKTWLTNNFPEAEATLCKGATEAD 119

Query: 122 ILELENVLEVKLPLPTRILYRFHNGQEIANGDLESDTFGSSLGLIGGYSFYSHL 175
           I ELENVL+VKLPLP+RILYRFHNGQEIA  D E+ T+GSSLGLIGGYSFYSHL
Sbjct: 120 IQELENVLKVKLPLPSRILYRFHNGQEIAKADPETTTYGSSLGLIGGYSFYSHL 173


>Glyma12g05510.1 
          Length = 443

 Score =  335 bits (859), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 154/185 (83%), Positives = 172/185 (92%)

Query: 176 QQDAMLLWFEEHGRRLQQGFIKLHEEGNNRSINLFPEEPPLCSTAITNGVQVRASALFVP 235
           QQDAMLLW EEHGRRL+ GFIKLH+EGN +SINLFPEEP +CSTA+TNGV+VRASAL +P
Sbjct: 259 QQDAMLLWLEEHGRRLEHGFIKLHDEGNGKSINLFPEEPHICSTAVTNGVKVRASALVIP 318

Query: 236 ELSDLQDDLEKYLFAYSIRMSLHPEGCIINGMSFSSCQLHWRHWIIRANDIVVSDVNGEA 295
           EL DLQDDL +YLFAYSIR+SL P+GCIINGMSFSSCQLHWRHWIIRANDIV+SDV+G+A
Sbjct: 319 ELMDLQDDLGEYLFAYSIRLSLEPQGCIINGMSFSSCQLHWRHWIIRANDIVISDVSGKA 378

Query: 296 VIGMFPLLRPGAEEFVYQSCTYLPTSSGSVEGSFTFVPGRLANPKGDSFLATVDRFPIQL 355
           VIG FPLLRPGA+EFVYQSCT LPT SGS+EGSFTF+PGRLA+PKGD FLATV RFP+QL
Sbjct: 379 VIGQFPLLRPGAQEFVYQSCTPLPTPSGSIEGSFTFIPGRLADPKGDPFLATVARFPLQL 438

Query: 356 PDYIF 360
           PDYIF
Sbjct: 439 PDYIF 443



 Score =  270 bits (690), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 128/174 (73%), Positives = 146/174 (83%), Gaps = 1/174 (0%)

Query: 2   MGLETVVDLAIHDVLRRLSPEDIARVACVSKKLRSLAFDDDSLWLTICISELDLHQPLDH 61
           MGLE+V DLAI+ +L++L  +DIARVACVSK+  S A  DD+LW+ +C +EL L QPLDH
Sbjct: 1   MGLESVGDLAINVILKKLGAQDIARVACVSKRFSSSA-SDDTLWINLCFNELALTQPLDH 59

Query: 62  LGNPLPSFKATYQAWREAFAMYPWSLVKRVKQCWDKLKTWLVNNFPEAEATLCKGASEAE 121
           LGNPL SFK  Y AWR AF MYPWSLVKRVK+CWD++KTWL NNFPEAEATLCKGA+EA+
Sbjct: 60  LGNPLSSFKECYLAWRGAFVMYPWSLVKRVKRCWDRIKTWLTNNFPEAEATLCKGATEAD 119

Query: 122 ILELENVLEVKLPLPTRILYRFHNGQEIANGDLESDTFGSSLGLIGGYSFYSHL 175
           I ELENVL+VKLPLPTRILYRFHNGQE A  D E+ TFG SLGLIGGYSFY HL
Sbjct: 120 IQELENVLKVKLPLPTRILYRFHNGQEFAKADPETSTFGRSLGLIGGYSFYGHL 173


>Glyma11g13500.2 
          Length = 426

 Score =  288 bits (736), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 131/158 (82%), Positives = 146/158 (92%)

Query: 176 QQDAMLLWFEEHGRRLQQGFIKLHEEGNNRSINLFPEEPPLCSTAITNGVQVRASALFVP 235
           QQDAMLLW EEHGRRL+ GFIKLH++GN +SINLFPEEPPLCS A+TNGV+VRASAL +P
Sbjct: 259 QQDAMLLWLEEHGRRLEHGFIKLHDKGNGKSINLFPEEPPLCSMAVTNGVKVRASALVIP 318

Query: 236 ELSDLQDDLEKYLFAYSIRMSLHPEGCIINGMSFSSCQLHWRHWIIRANDIVVSDVNGEA 295
           EL DLQDDLEKYLFAYSIR+SL P+GC INGMSFSSCQLHWRHWIIRANDIV+SDVNGEA
Sbjct: 319 ELIDLQDDLEKYLFAYSIRLSLEPQGCTINGMSFSSCQLHWRHWIIRANDIVISDVNGEA 378

Query: 296 VIGMFPLLRPGAEEFVYQSCTYLPTSSGSVEGSFTFVP 333
           VIG +PLLRPGA+EFVYQS  +LPT SGS+EGSFTF+P
Sbjct: 379 VIGQYPLLRPGAQEFVYQSRMHLPTPSGSIEGSFTFIP 416



 Score =  273 bits (697), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 131/174 (75%), Positives = 146/174 (83%), Gaps = 1/174 (0%)

Query: 2   MGLETVVDLAIHDVLRRLSPEDIARVACVSKKLRSLAFDDDSLWLTICISELDLHQPLDH 61
           MGLE+V DLAIH +L +L  +D ARVACVSK+  S A  DD+LW+  C  EL L QPLDH
Sbjct: 1   MGLESVGDLAIHVILSKLGAQDTARVACVSKRFCSSA-SDDTLWINHCFHELALTQPLDH 59

Query: 62  LGNPLPSFKATYQAWREAFAMYPWSLVKRVKQCWDKLKTWLVNNFPEAEATLCKGASEAE 121
           LGNPL SFK  YQAWR AF MYPWSLVKRVK+CWDK+KTWL NNFPEAEATLCKGA+EA+
Sbjct: 60  LGNPLSSFKECYQAWRGAFVMYPWSLVKRVKRCWDKIKTWLTNNFPEAEATLCKGATEAD 119

Query: 122 ILELENVLEVKLPLPTRILYRFHNGQEIANGDLESDTFGSSLGLIGGYSFYSHL 175
           I ELENVL+VKLPLP+RILYRFHNGQEIA  D E+ T+GSSLGLIGGYSFYSHL
Sbjct: 120 IQELENVLKVKLPLPSRILYRFHNGQEIAKADPETTTYGSSLGLIGGYSFYSHL 173


>Glyma14g12250.1 
          Length = 187

 Score =  119 bits (297), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 57/72 (79%), Positives = 63/72 (87%)

Query: 227 VRASALFVPELSDLQDDLEKYLFAYSIRMSLHPEGCIINGMSFSSCQLHWRHWIIRANDI 286
           V ASAL + EL D+QDDL+KYLFAYSIR+SL P+GCIING SFSS QLH RH IIRANDI
Sbjct: 80  VCASALVMLELIDVQDDLQKYLFAYSIRLSLEPQGCIINGTSFSSSQLHGRHGIIRANDI 139

Query: 287 VVSDVNGEAVIG 298
           V+SDVNGEAVIG
Sbjct: 140 VISDVNGEAVIG 151


>Glyma04g15180.1 
          Length = 167

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/93 (52%), Positives = 61/93 (65%), Gaps = 11/93 (11%)

Query: 208 NLFPEEPPLCSTAITNGVQVRASALFVPELSDLQDDLEKYLFAYSIRMSLHPEGCIINGM 267
           +L  +E   C   ++  + V AS L +P+L DLQD LE+YLFAYSIR+SL P+GCIINGM
Sbjct: 67  HLTRKENETCEIHVSK-LMVHASTLVIPKLIDLQDHLEEYLFAYSIRLSLEPQGCIINGM 125

Query: 268 SFSSCQLHWRHWIIRANDIVVSDVNGEAVIGMF 300
                     H IIR NDIV+SDVNG+ V G F
Sbjct: 126 ----------HLIIRVNDIVISDVNGKVVKGHF 148


>Glyma17g09620.1 
          Length = 264

 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 12/116 (10%)

Query: 217 CSTAITNGVQVRASALFVPELSDLQDDLEKYLFAYSIRMSLHPEGCIINGMSFSSCQLHW 276
           CS A T G++V+  ++++   S     L  Y FAY IR++ + E  +         QL  
Sbjct: 131 CSDATTLGIRVQVRSVYIEGRSQPSKGL--YFFAYRIRITNNSEHPV---------QLLR 179

Query: 277 RHWIIRANDIVVSDVNGEAVIGMFPLLRPGAEEFVYQSCTYLPTSSGSVEGSFTFV 332
           RHWII   +    +V G  V+G  PL+ PG   F Y S   L T +G +EG +  +
Sbjct: 180 RHWIITDANGRTENVWGIGVVGEQPLILPG-NSFEYSSACPLNTPNGRMEGDYEMI 234


>Glyma05g02320.1 
          Length = 265

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 18/119 (15%)

Query: 217 CSTAITNGVQVRASALFVPELSDLQDDLEKYLFAYSIRM---SLHPEGCIINGMSFSSCQ 273
           CS A T G++V+  ++++   S     L  Y FAY IR+   S HP             Q
Sbjct: 132 CSDATTLGIRVQVRSVYIEGRSQPSKGL--YFFAYRIRITNNSDHP------------VQ 177

Query: 274 LHWRHWIIRANDIVVSDVNGEAVIGMFPLLRPGAEEFVYQSCTYLPTSSGSVEGSFTFV 332
           L  RHWII   +    +V G  V+G  PL+ PG   F Y S   L T +G +EG +  +
Sbjct: 178 LLRRHWIITDANGRTENVWGIGVVGEQPLILPG-NSFEYSSACPLNTPNGRMEGDYEMI 235