Miyakogusa Predicted Gene

Lj0g3v0088129.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0088129.1 Non Chatacterized Hit- tr|I3SXF4|I3SXF4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,89.13,0.00000000000001,UMP1,Proteasome maturation factor
UMP1,CUFF.4712.1
         (56 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02180.1                                                        66   1e-11
Glyma12g02180.2                                                        65   1e-11
Glyma11g09870.1                                                        65   2e-11

>Glyma12g02180.1 
          Length = 144

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 34/38 (89%)

Query: 9  ASKTIPHQIGGVHNDLLLFGIHGVKSDIVDAHPLESSL 46
          ASK IPHQIGGV ND+L FG+HGVKSDIV +HPL+SSL
Sbjct: 6  ASKFIPHQIGGVQNDVLRFGLHGVKSDIVGSHPLQSSL 43


>Glyma12g02180.2 
          Length = 142

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 34/38 (89%)

Query: 9  ASKTIPHQIGGVHNDLLLFGIHGVKSDIVDAHPLESSL 46
          ASK IPHQIGGV ND+L FG+HGVKSDIV +HPL+SSL
Sbjct: 6  ASKFIPHQIGGVQNDVLRFGLHGVKSDIVGSHPLQSSL 43


>Glyma11g09870.1 
          Length = 144

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/38 (78%), Positives = 33/38 (86%)

Query: 9  ASKTIPHQIGGVHNDLLLFGIHGVKSDIVDAHPLESSL 46
          ASK IPHQIGGV ND L FG+HGVKSDIV +HPL+SSL
Sbjct: 6  ASKFIPHQIGGVQNDALRFGLHGVKSDIVGSHPLQSSL 43