Miyakogusa Predicted Gene

Lj0g3v0085159.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0085159.2 tr|G7JV28|G7JV28_MEDTR HVA22-like protein a
OS=Medicago truncatula GN=MTR_4g093270 PE=4
SV=1,53.77,6e-18,zf-met,NULL,CUFF.4494.2
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07120.1                                                       147   6e-36
Glyma17g27180.1                                                        55   3e-08
Glyma17g08060.1                                                        55   3e-08
Glyma02g36630.2                                                        52   3e-07
Glyma02g36630.1                                                        52   3e-07

>Glyma08g07120.1 
          Length = 386

 Score =  147 bits (371), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 77/119 (64%), Positives = 88/119 (73%), Gaps = 5/119 (4%)

Query: 2   LQTEHKDIKDLEVIEKKEIPAGKQDIPSTPNLAPSQNASSTMVESKGIAVKVKAGEEFPQ 61
           LQT+ K IKDLEVIEKKEI AGKQDI   PNL PSQNAS  MVE+K +  K  A  E P+
Sbjct: 187 LQTQQKTIKDLEVIEKKEILAGKQDISVVPNLVPSQNASPAMVETKILVGKDTASGELPE 246

Query: 62  SSIHKEVQKEWTCALCQVSASSEKNLNFHLHGKKHRAAHEALKAKSSKAKTQPVPQKLK 120
           SS HKEVQKEWTCALC V+ SSEK L  HLHG+KH+A  E+LKA++     QPVP K+K
Sbjct: 247 SSTHKEVQKEWTCALCHVTTSSEKTLIDHLHGRKHKATCESLKAQN-----QPVPHKVK 300


>Glyma17g27180.1 
          Length = 361

 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 33/44 (75%)

Query: 63  SIHKEVQKEWTCALCQVSASSEKNLNFHLHGKKHRAAHEALKAK 106
           S+ K+ +KEWTC LCQ+S +SEK LN H+ GKKH+A  E+ + +
Sbjct: 198 SLRKKAKKEWTCELCQISTTSEKGLNDHIQGKKHKANKESTRTQ 241


>Glyma17g08060.1 
          Length = 330

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 23/44 (52%), Positives = 33/44 (75%)

Query: 63  SIHKEVQKEWTCALCQVSASSEKNLNFHLHGKKHRAAHEALKAK 106
           S+ K+ +KEWTC LCQ+S +SEK LN H+ GKKH+A  E+ + +
Sbjct: 192 SLQKKAKKEWTCELCQISTTSEKGLNDHIQGKKHKANKESTRTQ 235


>Glyma02g36630.2 
          Length = 326

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 29/36 (80%)

Query: 63  SIHKEVQKEWTCALCQVSASSEKNLNFHLHGKKHRA 98
           S+ K+ ++EW+C LCQ++ ++EK LN HL GKKH+A
Sbjct: 189 SVEKKPKREWSCGLCQITTTNEKGLNNHLEGKKHKA 224


>Glyma02g36630.1 
          Length = 332

 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 29/36 (80%)

Query: 63  SIHKEVQKEWTCALCQVSASSEKNLNFHLHGKKHRA 98
           S+ K+ ++EW+C LCQ++ ++EK LN HL GKKH+A
Sbjct: 195 SVEKKPKREWSCGLCQITTTNEKGLNNHLEGKKHKA 230