Miyakogusa Predicted Gene
- Lj0g3v0081419.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0081419.1 Non Chatacterized Hit- tr|B9REU3|B9REU3_RICCO
Pre-rRNA-processing protein TSR2, putative OS=Ricinus
,48.03,3e-19,SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
seg,NULL,CUFF.4227.1
(126 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g23820.1 150 3e-37
Glyma19g01230.5 147 2e-36
Glyma19g01230.4 147 2e-36
Glyma19g01230.3 147 2e-36
Glyma19g01230.2 147 2e-36
Glyma19g01230.1 147 2e-36
Glyma18g29500.1 134 2e-32
Glyma08g38260.1 76 1e-14
>Glyma13g23820.1
Length = 201
Score = 150 bits (379), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
Query: 1 MLSLNVEVEDGSVEEVAENLMVMHEECLEGNFRSIEILKEANLKQAAHPRVTQIVXXXXX 60
MLSLNVEVEDGSVEEVAE LMVMHEE LEGNF S E L++ANL+QA P VTQI
Sbjct: 77 MLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLEQATLPHVTQIANEDDT 136
Query: 61 XXXXXXXXXXIIGASNSSNMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVSNRR 120
I+ NSS M++DI S+S+MNSVNRPVN LPKV+ EADD W VVSNRR
Sbjct: 137 DEDGDDDEKMIVD-DNSSKMNLDISTSDSNMNSVNRPVNEPLPKVSGEADDGWVVVSNRR 195
Query: 121 NKGRKN 126
NKGRKN
Sbjct: 196 NKGRKN 201
>Glyma19g01230.5
Length = 201
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Query: 1 MLSLNVEVEDGSVEEVAENLMVMHEECLEGNFRSIEILKEANLKQAAHPRVTQIVXXXXX 60
MLSLNVEVEDGSVEEVAE LMVMHEE LEGNF S E L++ANL+QA P VTQIV
Sbjct: 77 MLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLEQATLPHVTQIVNEDDS 136
Query: 61 XXXXXXXXXXIIGASNSSNMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVSNRR 120
I+ NSSNM+ +I S+S+MNSVNRPVN LPKV+ +ADD W VVSN+R
Sbjct: 137 DEDGDHDEKMIVD-DNSSNMNPEISTSDSNMNSVNRPVNEPLPKVSGKADDGWVVVSNKR 195
Query: 121 NKGRKN 126
NKGRKN
Sbjct: 196 NKGRKN 201
>Glyma19g01230.4
Length = 201
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Query: 1 MLSLNVEVEDGSVEEVAENLMVMHEECLEGNFRSIEILKEANLKQAAHPRVTQIVXXXXX 60
MLSLNVEVEDGSVEEVAE LMVMHEE LEGNF S E L++ANL+QA P VTQIV
Sbjct: 77 MLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLEQATLPHVTQIVNEDDS 136
Query: 61 XXXXXXXXXXIIGASNSSNMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVSNRR 120
I+ NSSNM+ +I S+S+MNSVNRPVN LPKV+ +ADD W VVSN+R
Sbjct: 137 DEDGDHDEKMIVD-DNSSNMNPEISTSDSNMNSVNRPVNEPLPKVSGKADDGWVVVSNKR 195
Query: 121 NKGRKN 126
NKGRKN
Sbjct: 196 NKGRKN 201
>Glyma19g01230.3
Length = 201
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Query: 1 MLSLNVEVEDGSVEEVAENLMVMHEECLEGNFRSIEILKEANLKQAAHPRVTQIVXXXXX 60
MLSLNVEVEDGSVEEVAE LMVMHEE LEGNF S E L++ANL+QA P VTQIV
Sbjct: 77 MLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLEQATLPHVTQIVNEDDS 136
Query: 61 XXXXXXXXXXIIGASNSSNMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVSNRR 120
I+ NSSNM+ +I S+S+MNSVNRPVN LPKV+ +ADD W VVSN+R
Sbjct: 137 DEDGDHDEKMIVD-DNSSNMNPEISTSDSNMNSVNRPVNEPLPKVSGKADDGWVVVSNKR 195
Query: 121 NKGRKN 126
NKGRKN
Sbjct: 196 NKGRKN 201
>Glyma19g01230.2
Length = 201
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Query: 1 MLSLNVEVEDGSVEEVAENLMVMHEECLEGNFRSIEILKEANLKQAAHPRVTQIVXXXXX 60
MLSLNVEVEDGSVEEVAE LMVMHEE LEGNF S E L++ANL+QA P VTQIV
Sbjct: 77 MLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLEQATLPHVTQIVNEDDS 136
Query: 61 XXXXXXXXXXIIGASNSSNMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVSNRR 120
I+ NSSNM+ +I S+S+MNSVNRPVN LPKV+ +ADD W VVSN+R
Sbjct: 137 DEDGDHDEKMIVD-DNSSNMNPEISTSDSNMNSVNRPVNEPLPKVSGKADDGWVVVSNKR 195
Query: 121 NKGRKN 126
NKGRKN
Sbjct: 196 NKGRKN 201
>Glyma19g01230.1
Length = 201
Score = 147 bits (372), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Query: 1 MLSLNVEVEDGSVEEVAENLMVMHEECLEGNFRSIEILKEANLKQAAHPRVTQIVXXXXX 60
MLSLNVEVEDGSVEEVAE LMVMHEE LEGNF S E L++ANL+QA P VTQIV
Sbjct: 77 MLSLNVEVEDGSVEEVAEKLMVMHEEFLEGNFSSFEDLRKANLEQATLPHVTQIVNEDDS 136
Query: 61 XXXXXXXXXXIIGASNSSNMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVSNRR 120
I+ NSSNM+ +I S+S+MNSVNRPVN LPKV+ +ADD W VVSN+R
Sbjct: 137 DEDGDHDEKMIVD-DNSSNMNPEISTSDSNMNSVNRPVNEPLPKVSGKADDGWVVVSNKR 195
Query: 121 NKGRKN 126
NKGRKN
Sbjct: 196 NKGRKN 201
>Glyma18g29500.1
Length = 203
Score = 134 bits (338), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 87/127 (68%), Gaps = 1/127 (0%)
Query: 1 MLSLNVEVEDGSVEEVAENLMVMHEECLEGNFRSIEILKEANLKQAAHPRVTQIV-XXXX 59
MLSLNVEVEDGS+EEVAE LMVMHEE LE NF S E L++ANL+ AA P V QIV
Sbjct: 77 MLSLNVEVEDGSIEEVAEKLMVMHEEFLEDNFSSFENLRKANLEHAARPPVPQIVNDDED 136
Query: 60 XXXXXXXXXXXIIGASNSSNMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVSNR 119
+I NSSNM+ + S ++ NSVNR VNG LPKV+ EADD W VVSNR
Sbjct: 137 DTDEDVGNDENMIVDDNSSNMNPETSTSVANTNSVNRSVNGPLPKVSGEADDGWVVVSNR 196
Query: 120 RNKGRKN 126
RNKGRKN
Sbjct: 197 RNKGRKN 203
>Glyma08g38260.1
Length = 105
Score = 75.9 bits (185), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 20 LMVMHEECLEGNFRSIEILKEANLKQAAHPRVTQIVXXXXXXXXXXXXXXX-IIGASNSS 78
+ MH E LEGNF S E L++ANL +AA P V QIV +I NSS
Sbjct: 4 FIFMHGEFLEGNFSSFENLRKANL-EAARPHVPQIVNDDEDDTDEDVDNDENMIVDDNSS 62
Query: 79 NMDVDIPKSESDMNSVNRPVNGTLPKVAAEADDEWTVVSNRR 120
NM+ + S ++ NSVNR N LP V+ EADDEW VVSNR+
Sbjct: 63 NMNPETSTSVANTNSVNRTDNEPLPNVSGEADDEWVVVSNRK 104