Miyakogusa Predicted Gene

Lj0g3v0067819.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0067819.3 tr|Q17BC3|Q17BC3_AEDAE AAEL005005-PA OS=Aedes
aegypti GN=AAEL005005 PE=4 SV=1,34.41,0.0003,F-box domain,F-box
domain, cyclin-like; F-box-like,NULL; no description,NULL; seg,NULL;
CCAAT-BOX DN,CUFF.3220.3
         (147 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g21550.1                                                       197   4e-51

>Glyma11g21550.1 
          Length = 266

 Score =  197 bits (500), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 91/123 (73%), Positives = 104/123 (84%), Gaps = 5/123 (4%)

Query: 10  RRQGKRWQRKRTXXXXXXXXXXXXXXHINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWN 69
           ++Q ++W+R +               HINNLDDGCLMHIF+FLPPIPDRFNTALVCHRWN
Sbjct: 4   QQQKQQWKRSQ-----RTKPSSSSSSHINNLDDGCLMHIFNFLPPIPDRFNTALVCHRWN 58

Query: 70  YLACHPRLWLRVDRSVKDLSQPGVFPNIETAVSASRPGDTILIAAGGSHHTSNIQIKKPL 129
           YLACHPRLWLRVDRSVK+LS+PGVFPNIETAVSASRPGDTILIAAGG+H  +NIQI+KPL
Sbjct: 59  YLACHPRLWLRVDRSVKELSEPGVFPNIETAVSASRPGDTILIAAGGTHRVANIQIRKPL 118

Query: 130 CLV 132
           CL+
Sbjct: 119 CLI 121