Miyakogusa Predicted Gene

Lj0g3v0064009.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0064009.1 Non Chatacterized Hit- tr|I1LUI3|I1LUI3_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,41.54,0.0003,RALF,Rapid ALkalinization
Factor,gene.Ljchr0_pseudomol_20120828.path1.gene5738.1
         (72 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g33370.1                                                        50   8e-07

>Glyma12g33370.1 
          Length = 74

 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 4  VFLSALLVCMLFTQDANAKAISNPVMRKDTIP-CSKRSPK-DPCPLPIAN-PYNRGCHPE 60
          + L  LL+  +  Q+  A+ IS   M+++TIP CSK  P    C LP+ N  Y RGC P 
Sbjct: 10 LVLCTLLLSAVLVQEVEARVISKEAMQRNTIPGCSKVHPNVAACHLPLVNINYRRGCEPG 69

Query: 61 QRCRS 65
          +RCR 
Sbjct: 70 ERCRQ 74