Miyakogusa Predicted Gene

Lj0g3v0063409.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0063409.1 Non Chatacterized Hit- tr|I1L7B1|I1L7B1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,87.1,0.0000007,
,CUFF.2880.1
         (51 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g00330.1                                                        58   2e-09
Glyma10g00210.1                                                        58   2e-09

>Glyma02g00330.1 
          Length = 850

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/31 (87%), Positives = 29/31 (93%)

Query: 2   LDEFPEAAGTEVSTIDSFQGLEADVVILSML 32
           LDEFPEAAGTEV+TIDSFQG EAD VILSM+
Sbjct: 744 LDEFPEAAGTEVATIDSFQGREADAVILSMV 774


>Glyma10g00210.1 
          Length = 890

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/31 (87%), Positives = 29/31 (93%)

Query: 2   LDEFPEAAGTEVSTIDSFQGLEADVVILSML 32
           LDEFPEAAGTEV+TIDSFQG EAD VILSM+
Sbjct: 781 LDEFPEAAGTEVATIDSFQGREADAVILSMV 811