Miyakogusa Predicted Gene

Lj0g3v0061939.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0061939.1 tr|B9HD36|B9HD36_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_560198 PE=4
SV=1,44.79,2e-17,Fasciclin,FAS1 domain; Four repeated domains in the
Fasciclin I fam,FAS1 domain; FAS1 domain,FAS1 do,CUFF.2777.1
         (253 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g15980.1                                                       280   1e-75
Glyma05g05680.1                                                       192   2e-49
Glyma14g01050.1                                                       111   6e-25
Glyma09g01460.1                                                       103   1e-22
Glyma15g12360.1                                                        65   5e-11

>Glyma17g15980.1 
          Length = 220

 Score =  280 bits (715), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/229 (67%), Positives = 172/229 (75%), Gaps = 15/229 (6%)

Query: 1   MEGKVFLVTXXXXXXISSVTPTD----NQNLLAATEEMQRANYFTFVMLVKMSQPDTRLE 56
           M   VFL+       ISS+TPT+    NQ+L+AAT+EMQ+ANYFTFVML+ MS  DT +E
Sbjct: 1   MVTMVFLI----LMLISSITPTEIDARNQDLVAATKEMQKANYFTFVMLINMSPLDT-IE 55

Query: 57  GNVTFLMPNDRMLANMNLQEGYVSSFLLRHSIPSPLLFGTLEQFPTGTTIPTSLPNCMLR 116
           GNVTFLMPNDRMLANM LQEG +SSFLLRHSIPSP+LF  LEQFPTGTTIPTSLPNCMLR
Sbjct: 56  GNVTFLMPNDRMLANMVLQEGSISSFLLRHSIPSPMLFDVLEQFPTGTTIPTSLPNCMLR 115

Query: 117 ISNNGRRNFALNNVKIISPNLCVAGSSIRCHGIDGVISESCISVYNNYSAPLAPSPIPCP 176
           +SNNGR+N+ LNNVKIISPNLCVAGSSIRCHGIDGV+SE C S+  NYS PL    IPC 
Sbjct: 116 VSNNGRKNYVLNNVKIISPNLCVAGSSIRCHGIDGVLSEVCASI-GNYSVPL----IPCV 170

Query: 177 NITDPSYKA-XXXXXXXXXXXXXXXRDNLSPPTLIAPNPTEANIRPEKS 224
           N T+PS KA                RDNL+PPTL AP PT  NI P KS
Sbjct: 171 NNTEPSCKASPPISSSFPSASPPSTRDNLNPPTLAAPQPTTLNIGPHKS 219


>Glyma05g05680.1 
          Length = 216

 Score =  192 bits (489), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/217 (54%), Positives = 139/217 (64%), Gaps = 35/217 (16%)

Query: 16  ISSVTPTD----NQNLLAATEEMQRANYFTFVMLVKMSQPDTRLEGNVTFLMPNDRMLAN 71
           ISS TPT+    N  L+AAT+EMQRANY TFVML+ MS  DT ++GNVTFLMPNDRML N
Sbjct: 9   ISSATPTEIDAKNPELVAATKEMQRANYSTFVMLINMSPLDT-IKGNVTFLMPNDRMLDN 67

Query: 72  MNLQEGYVSSFLLRHSIPSPLLFGTLEQFPTGTTIPTSLPNCMLRISNNGRRNFALNNVK 131
           M L+EG VS+FLLRHSIPSPLLF              +LPNCMLR+SNNGR+N+ LNNVK
Sbjct: 68  MVLEEGSVSNFLLRHSIPSPLLFD------------CALPNCMLRVSNNGRKNYVLNNVK 115

Query: 132 IISPNLCVAGSSIRCHGIDGVISESCISVYNNYSAPLAPSPIPCPNITDPSYK-AXXXXX 190
           IISPNL             G++SE+C S+  NY  PL    +PC N T+PS K +     
Sbjct: 116 IISPNLY------------GILSEACTSI-GNYGVPL----LPCVNSTEPSCKASPPIPS 158

Query: 191 XXXXXXXXXXRDNLSPPTLIAPNPTEANIRPEKSGSP 227
                     RDNL+PPTL AP PT  N  P KSGSP
Sbjct: 159 SSPSASPPSTRDNLNPPTLAAPRPTTPNFGPHKSGSP 195


>Glyma14g01050.1 
          Length = 174

 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 53/131 (40%), Positives = 87/131 (66%), Gaps = 3/131 (2%)

Query: 26  NLLAATEEMQRANYFTFVMLVKM--SQPDTRLEGNVTFLMPNDRMLANMNLQEGYVSSFL 83
           +L AA  +M+  +Y+ FV+L+K+  SQP++    ++TFLMPND  L+  ++    +  F+
Sbjct: 7   DLQAAMTDMRSRSYYGFVILLKILNSQPNSLQNNDLTFLMPNDDELSQFSIALDQLHDFI 66

Query: 84  LRHSIPSPLLFGTLEQFPTGTTIPTSLPNCMLRISNNGRRNFALNNVKIISPNLCVAGSS 143
           L HSIP+PL+   L  FP G+ +P+S+P+ ++ I+N GR    +NN +I++PN+C   SS
Sbjct: 67  LSHSIPTPLVLSHLLHFPNGSVVPSSVPSRVISITNGGRTGLFVNNARIVTPNVC-QSSS 125

Query: 144 IRCHGIDGVIS 154
           IRCHGI   ++
Sbjct: 126 IRCHGISAALT 136


>Glyma09g01460.1 
          Length = 122

 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/124 (42%), Positives = 80/124 (64%), Gaps = 8/124 (6%)

Query: 29  AATEEMQRANYFTFVMLVKM----SQPDTRLEGNVTFLMPNDRMLANMNLQEGYVSSFLL 84
           AA  +M+  +Y+ F ML++M    SQP+ R   ++TFLMP+D+ L+  ++    V  FLL
Sbjct: 3   AAIGDMRAKSYYGFAMLLQMLNGTSQPNNR---DLTFLMPDDKELSASSISIDEVEEFLL 59

Query: 85  RHSIPSPLLFGTLEQFPTGTTIPTSLPNCMLRISNNGRRNFALNNVKIISPNLCVAGSSI 144
           +H+IP PL F  L  FPTGT +P+     M+RI N  R +F +NN +I+S N+C++ S I
Sbjct: 60  KHAIPMPLYFNDLSHFPTGTLVPSGNRTQMIRIHNRARGDFFVNNAQIVSANVCLS-SVI 118

Query: 145 RCHG 148
           +CHG
Sbjct: 119 KCHG 122


>Glyma15g12360.1 
          Length = 96

 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 50/79 (63%)

Query: 26  NLLAATEEMQRANYFTFVMLVKMSQPDTRLEGNVTFLMPNDRMLANMNLQEGYVSSFLLR 85
           +L AA  +M+  +Y+ FVML++M    ++   ++TFLMP+D+ L+  ++    V  F L+
Sbjct: 14  DLQAAIGDMRAKSYYGFVMLLQMLNGTSQPNRDLTFLMPDDKELSASSISTDEVEEFFLK 73

Query: 86  HSIPSPLLFGTLEQFPTGT 104
           H++P PL F  L  FPTGT
Sbjct: 74  HALPMPLYFNDLSHFPTGT 92