Miyakogusa Predicted Gene

Lj0g3v0035899.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0035899.1 tr|B0ZC71|B0ZC71_ARATH At1g67140 (Fragment)
OS=Arabidopsis thaliana PE=4 SV=1,44.38,2e-18, ,CUFF.1577.1
         (269 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g53520.1                                                       417   e-117
Glyma08g47940.1                                                       380   e-106

>Glyma18g53520.1 
          Length = 1113

 Score =  417 bits (1071), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 218/266 (81%), Positives = 239/266 (89%), Gaps = 1/266 (0%)

Query: 1   MQVQVIGLQFLKARIQRGVNTEDNSFFMFLVGELISDIFTFIHRMLKNTITRESVNIASE 60
           +QVQVIGLQFLKARIQRGVNTEDNSF MFLVGELI DIFT IH+MLKNTITRESV IASE
Sbjct: 577 VQVQVIGLQFLKARIQRGVNTEDNSFIMFLVGELIGDIFTLIHKMLKNTITRESVTIASE 636

Query: 61  CLSLMVLLQTLSKDNDCQRSFMNLLLEAIVMIFLSTGDGFSQDVSDLRSTAIKLVSRLAQ 120
           CLSL+VLLQTLSK NDCQRSFM+LLLEAIVMIFLST DGFSQ+V+DLRSTA+KLVSRLAQ
Sbjct: 637 CLSLLVLLQTLSKGNDCQRSFMDLLLEAIVMIFLSTEDGFSQEVNDLRSTAVKLVSRLAQ 696

Query: 121 IPSSANHFKDVLLSMPPLYRQQLQGVIRASVTQDKNPLELKVPVLDIKMPQSSGQNEEKH 180
           IPSSA HFKDVLLSMPPL+RQQLQGVIRASVT DKNP +LKVPVLDIKMP+ S   EEKH
Sbjct: 697 IPSSAIHFKDVLLSMPPLHRQQLQGVIRASVTHDKNPTDLKVPVLDIKMPKPSEGTEEKH 756

Query: 181 TV-SSAPVMRTDENDKEEDEVSEDDWDAFQSFPVSKTEDGDESRIEHAAEGKDPSLVESS 239
           +V SSA VM+TDENDKEEDE SEDDWDAFQSFPVSK+EDGD+S+ E+ AEGKDPS V+ S
Sbjct: 757 SVPSSAAVMQTDENDKEEDEFSEDDWDAFQSFPVSKSEDGDDSKTEYVAEGKDPSTVKMS 816

Query: 240 SDREGSIVSVEFQESSVLKSLNREKD 265
           S+ E SI  VEFQE S+ KS+N EK+
Sbjct: 817 SEIESSIGGVEFQECSISKSINSEKE 842


>Glyma08g47940.1 
          Length = 585

 Score =  380 bits (976), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/235 (83%), Positives = 213/235 (90%), Gaps = 1/235 (0%)

Query: 1   MQVQVIGLQFLKARIQRGVNTEDNSFFMFLVGELISDIFTFIHRMLKNTITRESVNIASE 60
           MQVQVIGLQFLKARIQRGVNTEDNSF MFLVGELI+DIFT I +MLKNTITRESV IASE
Sbjct: 226 MQVQVIGLQFLKARIQRGVNTEDNSFIMFLVGELIADIFTLIQKMLKNTITRESVTIASE 285

Query: 61  CLSLMVLLQTLSKDNDCQRSFMNLLLEAIVMIFLSTGDGFSQDVSDLRSTAIKLVSRLAQ 120
           CLSL+VLLQTLSK +DCQRSFMNLLLEAIVMIFLST DG SQ+V++LRST +KLVSRLAQ
Sbjct: 286 CLSLLVLLQTLSKGDDCQRSFMNLLLEAIVMIFLSTEDGISQEVNNLRSTTVKLVSRLAQ 345

Query: 121 IPSSANHFKDVLLSMPPLYRQQLQGVIRASVTQDKNPLELKVPVLDIKMPQSSGQNEEKH 180
           IPSSA H KDVLLSMPPL+RQQLQGVIRASVT DKNP ++KVPVLDIKMP+ S   EEKH
Sbjct: 346 IPSSAIHVKDVLLSMPPLHRQQLQGVIRASVTHDKNPTDIKVPVLDIKMPKPSEGTEEKH 405

Query: 181 TV-SSAPVMRTDENDKEEDEVSEDDWDAFQSFPVSKTEDGDESRIEHAAEGKDPS 234
           T+ SSA VM+TDENDKEEDE SEDDWDAFQSFPVSK+ED D+S+ EH AEGKDPS
Sbjct: 406 TIPSSAAVMQTDENDKEEDEFSEDDWDAFQSFPVSKSEDEDDSKTEHVAEGKDPS 460