Miyakogusa Predicted Gene

Lj0g3v0008169.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0008169.1 Non Chatacterized Hit- tr|I1MZE2|I1MZE2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,62.71,0.00000002,
,916_g.1
         (58 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g04500.1                                                        64   5e-11
Glyma11g33720.1                                                        58   2e-09

>Glyma18g04500.1 
          Length = 584

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 40/59 (67%), Gaps = 8/59 (13%)

Query: 1  MKRDHQDSCKGGNTESGRNSVGTVKGECSSMP-NDKAKMWEEEHGGAAGVDELLAALGY 58
          MKRDH+DSC GG   S       VKGECSSMP N KA MWEE+     G+DELLAALGY
Sbjct: 1  MKRDHRDSCGGGGGGS-------VKGECSSMPSNGKANMWEEQQQQQQGMDELLAALGY 52


>Glyma11g33720.1 
          Length = 595

 Score = 57.8 bits (138), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/68 (55%), Positives = 41/68 (60%), Gaps = 15/68 (22%)

Query: 1  MKRDHQDSCKGGNTESGRNSVGTVKGECSSM-PNDKAKMWEEE---------HGGAAGVD 50
          MKRDH+DSC       G  + GTVKGECSSM  N KAKMWEEE              G+D
Sbjct: 1  MKRDHKDSC-----GGGGAAGGTVKGECSSMQSNGKAKMWEEEQQQQQQQQQQQQQQGMD 55

Query: 51 ELLAALGY 58
          ELLAALGY
Sbjct: 56 ELLAALGY 63