Miyakogusa Predicted Gene
- Lj6g3v2193500.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj6g3v2193500.1 Non Characterized Hit- tr|F6H6F9|F6H6F9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,30.71,1e-18,seg,NULL; DNAJ_2,Heat shock protein DnaJ, N-terminal;
Chaperone J-domain,Heat shock protein DnaJ, N-,CUFF.60873.1
(495 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g093930.1 | chaperone DnaJ-domain protein | HC | chr4:3718... 293 2e-79
Medtr2g009520.1 | chaperone DnaJ-domain protein | HC | chr2:1950... 199 4e-51
Medtr5g066100.1 | chaperone DnaJ-domain protein | HC | chr5:2786... 172 5e-43
Medtr3g100330.1 | chaperone DnaJ-domain protein | HC | chr3:4613... 94 3e-19
Medtr6g059870.1 | DnaJ heat shock amine-terminal domain protein ... 92 1e-18
Medtr3g091040.1 | DnaJ heat shock amine-terminal domain protein ... 80 5e-15
Medtr8g068845.1 | chaperone DnaJ-domain protein | HC | chr8:2880... 67 6e-11
Medtr5g097170.2 | DnaJ heat shock amine-terminal domain protein ... 64 3e-10
Medtr5g097170.1 | DnaJ heat shock amine-terminal domain protein ... 64 3e-10
Medtr3g099170.1 | DnaJ heat shock amine-terminal domain protein ... 60 4e-09
Medtr5g032370.1 | chaperone DnaJ-domain protein | HC | chr5:1389... 57 4e-08
Medtr4g118660.1 | DnaJ heat shock amine-terminal domain protein ... 57 4e-08
Medtr3g082810.1 | DnaJ heat shock amine-terminal domain protein ... 56 7e-08
>Medtr4g093930.1 | chaperone DnaJ-domain protein | HC |
chr4:37183397-37185527 | 20130731
Length = 489
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/329 (48%), Positives = 186/329 (56%), Gaps = 26/329 (7%)
Query: 6 GGNRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARI 65
GGNRAEAERWLYTANKLLSARDLHGARSFAIRA+ESDP F+A+ELLLAVIDTLLAGE+RI
Sbjct: 3 GGNRAEAERWLYTANKLLSARDLHGARSFAIRARESDPTFDASELLLAVIDTLLAGESRI 62
Query: 66 KD-LVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFN 124
D D Y ILQ++RYT NI+ IA QYRRLA LLD SLV DAW++L N
Sbjct: 63 NDHHRDWYGILQILRYTTNIDHIANQYRRLALLLDPNRNPFAFSGHAFSLVHDAWSVLSN 122
Query: 125 PTKKAFYDNQLRFITEXXXXXXXXXXXXXXXXXXXXXXVQNHXXXXXXXXXXXXXXXXXX 184
P KKA YD+ LR +T +Q
Sbjct: 123 PAKKAMYDSDLRLLTTPPVPSQPQPQLAPQYQQPPQQPLQQPPQPTPRKNSRSRDSTGAT 182
Query: 185 XXRPSQDNVTE-PTQPSENDGRT-------------FWTACPYCYAMFEYPSVYEECTLR 230
P+ P++ E +T FWT CPYCY +EYP YE+CTLR
Sbjct: 183 ATEPTLSRQNRNPSEAGETTRQTRIASAAETVGNISFWTLCPYCYVHYEYPKEYEDCTLR 242
Query: 231 CQSCRRGFHGVAVRSLPPGLTEEEGGLTSFCSWGFFPVGFSGDLKSIGGASSEWNPFSPL 290
CQSCRRGFH V +RS P + +SFC+WGFFP+GFSGD K + GASS WNP +PL
Sbjct: 243 CQSCRRGFHAVVIRSPPVNEID-----SSFCTWGFFPLGFSGDSKDLNGASSNWNPIAPL 297
Query: 291 FPCALNXXXXXXXXXXXXPKVYYYDEAAV 319
FPC + YYDE A
Sbjct: 298 FPCTMKGSSNRKK------NWVYYDEEAT 320
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 52/64 (81%), Positives = 57/64 (89%), Gaps = 3/64 (4%)
Query: 434 LDLNVEFSNEVEEPAHGVR--EGNGTGHAEDNIEGIGFFEGLDEFILSSLPILNVVADDK 491
LDLNVEFSN+VEEP+ GVR EGN TG+AEDNI+G+GFFEGLDEF LSSLPILN V DDK
Sbjct: 427 LDLNVEFSNDVEEPSRGVRAREGNATGNAEDNIDGVGFFEGLDEF-LSSLPILNPVGDDK 485
Query: 492 VKGH 495
VKGH
Sbjct: 486 VKGH 489
>Medtr2g009520.1 | chaperone DnaJ-domain protein | HC |
chr2:1950900-1948713 | 20130731
Length = 534
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 107/134 (79%)
Query: 6 GGNRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARI 65
G NR EAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARI
Sbjct: 3 GSNRGEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARI 62
Query: 66 KDLVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFNP 125
K+ +D YAILQ++RYT NIE+IA QYRRLA LLD SLV DAW++ NP
Sbjct: 63 KEQIDYYAILQILRYTQNIEYIADQYRRLAILLDPNRNPFAYAAHAFSLVHDAWSIFSNP 122
Query: 126 TKKAFYDNQLRFIT 139
KKA YD QL F+T
Sbjct: 123 HKKALYDEQLHFLT 136
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/102 (61%), Positives = 76/102 (74%), Gaps = 3/102 (2%)
Query: 198 QPSENDGRTFWTACPYCYAMFEYPSVYEECTLRCQSCRRGFHGVAVRSLPPGLTEEEGGL 257
+PSE DG+TFWTACPYCY MFEYP VY +CTLRCQ+C+RGFH V VR+ P E+ G
Sbjct: 235 KPSETDGQTFWTACPYCYGMFEYPKVYVDCTLRCQNCKRGFHAVVVRAPPEVTEEDGGEG 294
Query: 258 TS---FCSWGFFPVGFSGDLKSIGGASSEWNPFSPLFPCALN 296
+ FCS+G FP+GFSG+ K I G+SSEWNP S LF C +N
Sbjct: 295 EAGGYFCSFGHFPLGFSGNFKDINGSSSEWNPMSALFHCPMN 336
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/66 (84%), Positives = 59/66 (89%), Gaps = 4/66 (6%)
Query: 433 KLDLNVEFSNEVEEP-AHGVREGN--GTGHAEDNIEGIGFFEGLDEFILSSLPILNVVAD 489
KLDLNVEFSNEVEE A GVR+GN GTG+AEDNIEGIGFFEGLDEF L+SLPILNVVAD
Sbjct: 470 KLDLNVEFSNEVEEASASGVRQGNVNGTGNAEDNIEGIGFFEGLDEF-LNSLPILNVVAD 528
Query: 490 DKVKGH 495
DKVK H
Sbjct: 529 DKVKCH 534
>Medtr5g066100.1 | chaperone DnaJ-domain protein | HC |
chr5:27863318-27861548 | 20130731
Length = 350
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 131/266 (49%), Gaps = 22/266 (8%)
Query: 7 GNRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIK 66
RAEAER L + KLL RDL G++ FAI AQE++P E ++ +LA+ID L+A E R+
Sbjct: 4 ATRAEAERLLGISEKLLQNRDLMGSKEFAILAQETEPLLEGSDQILAIIDVLIASEKRVN 63
Query: 67 DLVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFNPT 126
+ D Y+ILQ+ R +D+++ I QYRRLA LL LV DAWA+L +P
Sbjct: 64 NNPDWYSILQIDRRSDDLDLIKKQYRRLALLLHPDKSRFHFADHAFKLVADAWAVLSDPV 123
Query: 127 KKAFYDNQLRFITEXXXXXXXXXXXXXXXXXXXXXXVQNHXXXXXXXXXXXXXXXXXXXX 186
KK+ YD L F VQ
Sbjct: 124 KKSHYDKDLSFFAR--------------VDLSVPGWVQQD---KLPVRRTGPGPVNGPGP 166
Query: 187 RPSQDNVTEPTQPSENDGRTFWTACPYCYAMFEYPSVYEECTLRC--QSCRRGFHGVAVR 244
R S + E TFWT CPYCY ++E+P YE LRC SC + FHGV V
Sbjct: 167 RNSAASAREEVAADVRRNATFWTTCPYCYRLYEFPKAYEGFCLRCPNSSCDKSFHGVNVP 226
Query: 245 SLPPGLTEEEGGLTSFCSWGFFPVGF 270
SLPP + +E +C WGFFP+GF
Sbjct: 227 SLPPLVPGQEA---YYCCWGFFPMGF 249
>Medtr3g100330.1 | chaperone DnaJ-domain protein | HC |
chr3:46134173-46133083 | 20130731
Length = 228
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 202 NDGRTFWTACPYCYAMFEYPSVYEECTLRCQSCRRGFHGVAVRSLPPGLTEEEGGLTSFC 261
N FWTACPYCY M+EYP VYE C L CQ C + FHGV++ SLPP + +E +
Sbjct: 143 NGNVNFWTACPYCYHMYEYPRVYEGCCLMCQKCDKSFHGVSIPSLPPIVPGQEA---YYV 199
Query: 262 SWGFFPVGFSGDLKSIGGASS 282
SWG FP+GF + GGA +
Sbjct: 200 SWGMFPMGFVFESVENGGAGT 220
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Query: 8 NRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIK- 66
++AEAER L +LL RDL G+R A QE++P E ++ +LA++D L A E +
Sbjct: 4 SKAEAERLLEIGEELLQKRDLKGSREIANLVQETEPLLEGSDQILAIVDVLEAAEKPLNL 63
Query: 67 --DLVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFN 124
+D YA+LQ+ R + ++ I QYR LA LL LV+DAWA+L +
Sbjct: 64 NNHHLDWYAVLQIDRNSQDLNRIKKQYRTLALLLHPDKNPFSYAELAFKLVKDAWAVLSD 123
Query: 125 PTKKAFYDNQLRF 137
P +KA YD F
Sbjct: 124 PVQKAQYDKGFEF 136
>Medtr6g059870.1 | DnaJ heat shock amine-terminal domain protein |
HC | chr6:20552088-20546693 | 20130731
Length = 758
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 103/259 (39%), Gaps = 25/259 (9%)
Query: 8 NRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIKD 67
N+ EA R A K A+D GA+ FA++A P E ++A +D ++ E ++K
Sbjct: 4 NKDEATRAKEIAEKKFKAKDFLGAKKFALKAHNLFPSLEGIPQMIATLDVYISAENKVKG 63
Query: 68 LVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFNPTK 127
VD Y IL + D + + YR+LA +L L+ +AW++L + K
Sbjct: 64 EVDWYGILGANPHADE-DTVRKHYRKLALMLHPDKNKSSGSDGAFGLISEAWSILSDKDK 122
Query: 128 KAFYDNQLRFITEXXXXXXXXXXXXXXXXXXXXXXVQNHXXXXXXXXXXXXXXXXXXXXR 187
+A YD +++ + + +
Sbjct: 123 RAAYDAKIKAKPQKGSTIFGGSSTKATANGANNSKKK-----------------TPSSGK 165
Query: 188 PSQDNVTEPTQPSENDGR-TFWTACPYCYAMFEYPSVYEECTLRCQSCRRGFHGVAVRSL 246
++ EPT S N + TFWT C C+ +EY Y L C +C F VAV +
Sbjct: 166 SHKNMAKEPTSSSANASKSTFWTTCHRCHMQYEYLVKYLNLKLVCPNCHDAF--VAVETN 223
Query: 247 PPGLTEEEGGLTSFCSWGF 265
PP + G+ SW F
Sbjct: 224 PP----PKSGIRPGTSWNF 238
>Medtr3g091040.1 | DnaJ heat shock amine-terminal domain protein |
HC | chr3:41364850-41359987 | 20130731
Length = 761
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 91/243 (37%), Gaps = 20/243 (8%)
Query: 8 NRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIKD 67
N+ EA R A + S R+ GA+ FAI+A+ E L ID ++ E ++
Sbjct: 4 NKDEAVRAKEIAERKFSEREYIGAKKFAIKAKNLYADLEDISQFLTTIDIYISAENKVSG 63
Query: 68 LVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFNPTK 127
+D Y IL V + D E + QYR+LA L LV +AW+LL + TK
Sbjct: 64 EMDWYGILGVSPFADE-ETVRKQYRKLALTLHPDKNKSLGAEGAFQLVSEAWSLLSDKTK 122
Query: 128 KAFYDNQLRFITEXXXXXXXXXXXXXXXXXXXXXXVQNHXXXXXXXXXXXXXXXXXXXXR 187
+ Y NQ R + + R
Sbjct: 123 RLEY-NQKRSLK--------------GFQHTTPNRAGHPSNVPSSNGYYHFKKNATSNVR 167
Query: 188 PSQDNVTEP--TQPSENDGRTFWTACPYCYAMFEYPSVYEECTLRCQSCRRGFHGVAVRS 245
N P + P + TFWT C C +EY +Y TL C +C F VA+
Sbjct: 168 TGNHNARAPATSAPPQKKAETFWTICNKCRTHYEYLRIYLNHTLLCPNCNEAF--VAIER 225
Query: 246 LPP 248
PP
Sbjct: 226 SPP 228
>Medtr8g068845.1 | chaperone DnaJ-domain protein | HC |
chr8:28803221-28804438 | 20130731
Length = 256
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 206 TFWTACPYCYAMFEYPSVYEECTLRCQSCRRGFHGVAVRSLPPGLTEEEGGLTSFCSWGF 265
+FWT CPYC+ + EY YE+C+LRC +C+R FHG AV P + EG +C
Sbjct: 145 SFWTMCPYCWYLHEYERKYEDCSLRCANCKRTFHGTAVNP-PDSESMVEGKEQYYCYHMS 203
Query: 266 FPVGFSGDLKSIGGASSEWN 285
P+ + D GG+ E +
Sbjct: 204 LPLRYPVD----GGSQFELD 219
>Medtr5g097170.2 | DnaJ heat shock amine-terminal domain protein |
HC | chr5:42540858-42544278 | 20130731
Length = 692
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 7 GNRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIK 66
N+ EA + + A K S RD GA+++A++A+E P E +++ D +A E R
Sbjct: 3 ANKEEALKAIENAEKRFSQRDFAGAKNYALKAKELCPELEGISQMVSTFDVHIASEFRHN 62
Query: 67 DLVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFNPT 126
VD Y++L ++ T + E + QY++LA LL LV +AW L N
Sbjct: 63 GEVDYYSVLG-LKPTADKEAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLDNSM 121
Query: 127 KKAF 130
+ ++
Sbjct: 122 RSSY 125
>Medtr5g097170.1 | DnaJ heat shock amine-terminal domain protein |
HC | chr5:42540860-42544352 | 20130731
Length = 692
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 7 GNRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIK 66
N+ EA + + A K S RD GA+++A++A+E P E +++ D +A E R
Sbjct: 3 ANKEEALKAIENAEKRFSQRDFAGAKNYALKAKELCPELEGISQMVSTFDVHIASEFRHN 62
Query: 67 DLVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFNPT 126
VD Y++L ++ T + E + QY++LA LL LV +AW L N
Sbjct: 63 GEVDYYSVLG-LKPTADKEAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLDNSM 121
Query: 127 KKAF 130
+ ++
Sbjct: 122 RSSY 125
>Medtr3g099170.1 | DnaJ heat shock amine-terminal domain protein |
HC | chr3:45462948-45465687 | 20130731
Length = 823
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 56/119 (47%), Gaps = 1/119 (0%)
Query: 19 ANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIKDLVDCYAILQVV 78
A K++ +D AR A RA+ DP + LL ID LA E R+ VD Y IL
Sbjct: 29 AEKMILQKDFGVARLLARRARSLDPNNDDLPQLLETIDVYLAAEERVGAEVDWYKILG-A 87
Query: 79 RYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFNPTKKAFYDNQLRF 137
+ D+ E I Y+++A L SLV +AW +L + K+A YD + R
Sbjct: 88 QPLDDDETIRKCYKKMAFKLHPDKNKSVGADGAFSLVAEAWTILSDKDKRATYDQKYRL 146
>Medtr5g032370.1 | chaperone DnaJ-domain protein | HC |
chr5:13890194-13891669 | 20130731
Length = 310
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 211 CPYCYAMFEYPSVYEECTLRCQSCRRGFHGVAVRS-LPPGLTEEEG 255
CPYC+ +++Y YE+C+L CQ+C + FHGVAV+S + G T EG
Sbjct: 136 CPYCWNLYQYEKKYEDCSLMCQTCMKTFHGVAVKSPVKVGATVVEG 181
>Medtr4g118660.1 | DnaJ heat shock amine-terminal domain protein |
HC | chr4:49157259-49154272 | 20130731
Length = 995
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 8 NRAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARI-K 66
N+ EA R A K + RD GAR FA++AQ P E +L V D + E ++
Sbjct: 45 NKEEALRAKEIAEKKMENRDFAGARKFALKAQRLYPVLENIAQMLVVCDVHCSAEQKVFG 104
Query: 67 DLVDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALLFNPT 126
D ++ Y ILQ+ R T I Q+R+ A L L+ +A +L +
Sbjct: 105 DEINWYGILQLER-TAGDAMIKKQFRKFALQLHPDKNKFAGAEAAFKLIGEAQRVLSDRE 163
Query: 127 KKAFYDNQL 135
K+ YD +L
Sbjct: 164 KRTRYDMKL 172
>Medtr3g082810.1 | DnaJ heat shock amine-terminal domain protein |
HC | chr3:37377045-37380557 | 20130731
Length = 682
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 1/114 (0%)
Query: 9 RAEAERWLYTANKLLSARDLHGARSFAIRAQESDPRFEATELLLAVIDTLLAGEARIKDL 68
+ EA + + A K S RD GA+S+A++A+ P E L+ + +A +
Sbjct: 5 KEEALKAIENAEKRFSHRDFVGAKSYALKAKTLCPGLEGISQLVTTFEVYIASQVTCNGE 64
Query: 69 VDCYAILQVVRYTDNIEFIAAQYRRLASLLDXXXXXXXXXXXXXSLVQDAWALL 122
+D Y+I+ + T NIE + QY+++A LL LV +AWA L
Sbjct: 65 LDWYSIMGLNPST-NIEAVKKQYKKMAGLLHPDNNKCVGADGAFHLVSEAWARL 117