Miyakogusa Predicted Gene

Lj6g3v2145470.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2145470.1 Non Characterized Hit- tr|I3T2K9|I3T2K9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,72.12,0,NOT-MenG:
RraA family,Regulator of ribonuclease activity A;
Methyltransf_6,Ribonuclease E inhibitor ,CUFF.60709.1
         (168 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g010815.1 | regulator of ribonuclease activity protein A |...   222   1e-58
Medtr2g010800.1 | regulator of ribonuclease activity protein A |...   220   4e-58
Medtr7g080040.1 | regulator of ribonuclease activity protein A |...   202   8e-53
Medtr7g080040.3 | regulator of ribonuclease activity protein A |...   202   8e-53
Medtr7g080040.2 | regulator of ribonuclease activity protein A |...   202   8e-53

>Medtr2g010815.1 | regulator of ribonuclease activity protein A | HC
           | chr2:2539247-2537868 | 20130731
          Length = 166

 Score =  222 bits (566), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 104/165 (63%), Positives = 134/165 (81%), Gaps = 1/165 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M  L  A+ICD N   + +G++RIL PVFQ YGQ++ FSGP VTVKVFEDNVL++E+L+T
Sbjct: 1   MDSLPTAEICDTNATHLTNGDLRILHPVFQKYGQSQAFSGPAVTVKVFEDNVLVRELLET 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KGEG++LV+DGGGSMR AL+GG+LV+LA + GW+GIVVNGC+RDVD+I  C  +GV AL 
Sbjct: 61  KGEGRVLVVDGGGSMRCALVGGNLVQLAQNKGWSGIVVNGCIRDVDEINLC-QVGVRALA 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQI 165
           S+PL+  K GTG+KHV V+V G  I +GEWLYADNDG +VSKF++
Sbjct: 120 SHPLKSNKNGTGEKHVAVYVGGTFIRDGEWLYADNDGIIVSKFEL 164


>Medtr2g010800.1 | regulator of ribonuclease activity protein A | HC
           | chr2:2535122-2534613 | 20130731
          Length = 169

 Score =  220 bits (561), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 109/168 (64%), Positives = 133/168 (79%), Gaps = 1/168 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M     A+ICD N   IASG++RIL PVFQ YG  R FSGPIVTVKVFEDNVL +E+L+T
Sbjct: 1   MASPRTAEICDTNATHIASGDLRILHPVFQIYGHCRAFSGPIVTVKVFEDNVLARELLET 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KGEG++LVID GGSMR AL+GG+LV+LA + GW+GI+VNGCVRDVD+I  C  +GV ALG
Sbjct: 61  KGEGRVLVIDRGGSMRCALVGGNLVQLAQNTGWSGIIVNGCVRDVDEINLC-QVGVRALG 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQILHN 168
           SYPL   +KGTG+KHV V+V G  I +GEWLYAD+DG +VSKF++  N
Sbjct: 120 SYPLGSNEKGTGEKHVDVYVGGTFIRDGEWLYADSDGIIVSKFELSIN 167


>Medtr7g080040.1 | regulator of ribonuclease activity protein A | HC
           | chr7:30420879-30419169 | 20130731
          Length = 166

 Score =  202 bits (515), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 94/165 (56%), Positives = 129/165 (78%), Gaps = 1/165 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M  +  A++CD N + I SGE+R L P+FQ YG+ + FSGPIVT+KVFEDNVL++E L+ 
Sbjct: 1   MALVTTAEVCDANPQLILSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KG G++LV+DGG S+R A++GG+ V  A +NGWAGI+VNGC+RDVD+I  C +IGV ALG
Sbjct: 61  KGNGRVLVVDGGASLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGC-DIGVRALG 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQI 165
           S+P++  KKG G+KHVP+ +AG  I +GEWLYAD DG L+S+ ++
Sbjct: 120 SHPMKANKKGMGEKHVPITIAGTRIGDGEWLYADTDGILISRTEL 164


>Medtr7g080040.3 | regulator of ribonuclease activity protein A | HC
           | chr7:30420879-30419169 | 20130731
          Length = 166

 Score =  202 bits (515), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 94/165 (56%), Positives = 129/165 (78%), Gaps = 1/165 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M  +  A++CD N + I SGE+R L P+FQ YG+ + FSGPIVT+KVFEDNVL++E L+ 
Sbjct: 1   MALVTTAEVCDANPQLILSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KG G++LV+DGG S+R A++GG+ V  A +NGWAGI+VNGC+RDVD+I  C +IGV ALG
Sbjct: 61  KGNGRVLVVDGGASLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGC-DIGVRALG 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQI 165
           S+P++  KKG G+KHVP+ +AG  I +GEWLYAD DG L+S+ ++
Sbjct: 120 SHPMKANKKGMGEKHVPITIAGTRIGDGEWLYADTDGILISRTEL 164


>Medtr7g080040.2 | regulator of ribonuclease activity protein A | HC
           | chr7:30420901-30419102 | 20130731
          Length = 166

 Score =  202 bits (515), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 94/165 (56%), Positives = 129/165 (78%), Gaps = 1/165 (0%)

Query: 1   MGGLAIADICDVNTEKIASGEVRILDPVFQSYGQARTFSGPIVTVKVFEDNVLIKEVLQT 60
           M  +  A++CD N + I SGE+R L P+FQ YG+ + FSGPIVT+KVFEDNVL++E L+ 
Sbjct: 1   MALVTTAEVCDANPQLILSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60

Query: 61  KGEGKILVIDGGGSMRRALIGGHLVELAHSNGWAGIVVNGCVRDVDDIYECGNIGVMALG 120
           KG G++LV+DGG S+R A++GG+ V  A +NGWAGI+VNGC+RDVD+I  C +IGV ALG
Sbjct: 61  KGNGRVLVVDGGASLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGC-DIGVRALG 119

Query: 121 SYPLRPGKKGTGKKHVPVHVAGATIHEGEWLYADNDGGLVSKFQI 165
           S+P++  KKG G+KHVP+ +AG  I +GEWLYAD DG L+S+ ++
Sbjct: 120 SHPMKANKKGMGEKHVPITIAGTRIGDGEWLYADTDGILISRTEL 164