Miyakogusa Predicted Gene

Lj6g3v2045710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj6g3v2045710.1 Non Characterized Hit- tr|B9SR76|B9SR76_RICCO
Carnitine racemase, putative OS=Ricinus communis
GN=RC,48.08,9e-19,ClpP/crotonase,NULL; ECH,Crotonase, core; seg,NULL;
no description,NULL,CUFF.60605.1
         (112 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g013460.1 | enoyl-CoA hydratase/isomerase family protein |...   129   8e-31
Medtr7g024300.1 | enoyl-CoA hydratase/isomerase family protein |...   102   1e-22
Medtr7g024280.1 | enoyl-CoA hydratase/isomerase family protein |...    80   5e-16

>Medtr2g013460.1 | enoyl-CoA hydratase/isomerase family protein | HC
           | chr2:3628792-3630136 | 20130731
          Length = 239

 Score =  129 bits (323), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 69/105 (65%), Positives = 79/105 (75%), Gaps = 2/105 (1%)

Query: 1   MCSLEKRDNLWVLTLTGDDQNRLSPTVIQXXXXXXXXXXXQATPGSVLITTATG-RFFSN 59
           MCSLEKR NLW+LT+TGDDQNRL+P +I            Q+TPGSVLITTATG RFFSN
Sbjct: 1   MCSLEKRGNLWILTITGDDQNRLNPNLISSLLSTLTTLSSQSTPGSVLITTATGTRFFSN 60

Query: 60  GFDLTWARAAGSESAY-DRLQSMVDPLRPAGAALVSPPMPTIAAV 103
           GFDL WAR+A S SA  +RL SMV  L+P  AAL+S PMPTIAA+
Sbjct: 61  GFDLLWARSATSPSAATERLHSMVQSLKPVAAALMSLPMPTIAAI 105


>Medtr7g024300.1 | enoyl-CoA hydratase/isomerase family protein | HC
           | chr7:7973087-7974500 | 20130731
          Length = 233

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 51/103 (49%), Positives = 69/103 (66%), Gaps = 5/103 (4%)

Query: 1   MCSLEKRDNLWVLTLTGDDQNRLSPTVIQXXXXXXXXXXXQATPGSVLITTATGRFFSNG 60
           MCSLEK+ N+++LTLTG+D++RL+PT++            QAT  SVLITTA G+FFSNG
Sbjct: 1   MCSLEKKGNIFILTLTGNDEHRLNPTLLNSIKSALHRVRQQATTSSVLITTAHGKFFSNG 60

Query: 61  FDLTWARAAGSESAYDRLQSMVDPLRPAGAALVSPPMPTIAAV 103
           +D+ WA+   S     R+  + D LR   + L+S PMPTIAAV
Sbjct: 61  YDIDWAQDNKS-----RIILIDDLLRSVVSELLSLPMPTIAAV 98


>Medtr7g024280.1 | enoyl-CoA hydratase/isomerase family protein | HC
           | chr7:7967571-7966470 | 20130731
          Length = 254

 Score = 79.7 bits (195), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 61/103 (59%), Gaps = 6/103 (5%)

Query: 1   MCSLEKRDNLWVLTLTGDDQNRLSPTVIQXXXXXXXXXXXQATPGSVLITTATGRFFSNG 60
           MC++ K+ N++ LTL  +D++ L+PT++            QAT  SVLIT A  +FFSNG
Sbjct: 1   MCTIRKKGNIFFLTL-NNDEHCLNPTLLNSIKSTLHRVRQQATTSSVLITIAHDKFFSNG 59

Query: 61  FDLTWARAAGSESAYDRLQSMVDPLRPAGAALVSPPMPTIAAV 103
           +D+ WA++  S     R   + D LR   + L+S PMPTIA V
Sbjct: 60  YDIDWAQSNKS-----RFILIDDSLRSVLSELISLPMPTIAVV 97